A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising.

The exploration of retinal vessel structure is colossally important on account of numerous diseases including stroke, Diabetic Retinopathy (DR) and coronary heart diseases, which can damage the retinal vessel structure. The retinal vascular network is very hard to be extracted due to its spreading a...

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Main Authors: Khan Bahadar Khan, Amir A Khaliq, Abdul Jalil, Muhammad Shahid
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2018-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC5809116?pdf=render
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spelling doaj-195341375f154bb195b45703f58e43292020-11-25T02:36:43ZengPublic Library of Science (PLoS)PLoS ONE1932-62032018-01-01132e019220310.1371/journal.pone.0192203A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising.Khan Bahadar KhanAmir A KhaliqAbdul JalilMuhammad ShahidThe exploration of retinal vessel structure is colossally important on account of numerous diseases including stroke, Diabetic Retinopathy (DR) and coronary heart diseases, which can damage the retinal vessel structure. The retinal vascular network is very hard to be extracted due to its spreading and diminishing geometry and contrast variation in an image. The proposed technique consists of unique parallel processes for denoising and extraction of blood vessels in retinal images. In the preprocessing section, an adaptive histogram equalization enhances dissimilarity between the vessels and the background and morphological top-hat filters are employed to eliminate macula and optic disc, etc. To remove local noise, the difference of images is computed from the top-hat filtered image and the high-boost filtered image. Frangi filter is applied at multi scale for the enhancement of vessels possessing diverse widths. Segmentation is performed by using improved Otsu thresholding on the high-boost filtered image and Frangi's enhanced image, separately. In the postprocessing steps, a Vessel Location Map (VLM) is extracted by using raster to vector transformation. Postprocessing steps are employed in a novel way to reject misclassified vessel pixels. The final segmented image is obtained by using pixel-by-pixel AND operation between VLM and Frangi output image. The method has been rigorously analyzed on the STARE, DRIVE and HRF datasets.http://europepmc.org/articles/PMC5809116?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Khan Bahadar Khan
Amir A Khaliq
Abdul Jalil
Muhammad Shahid
spellingShingle Khan Bahadar Khan
Amir A Khaliq
Abdul Jalil
Muhammad Shahid
A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising.
PLoS ONE
author_facet Khan Bahadar Khan
Amir A Khaliq
Abdul Jalil
Muhammad Shahid
author_sort Khan Bahadar Khan
title A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising.
title_short A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising.
title_full A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising.
title_fullStr A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising.
title_full_unstemmed A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising.
title_sort robust technique based on vlm and frangi filter for retinal vessel extraction and denoising.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2018-01-01
description The exploration of retinal vessel structure is colossally important on account of numerous diseases including stroke, Diabetic Retinopathy (DR) and coronary heart diseases, which can damage the retinal vessel structure. The retinal vascular network is very hard to be extracted due to its spreading and diminishing geometry and contrast variation in an image. The proposed technique consists of unique parallel processes for denoising and extraction of blood vessels in retinal images. In the preprocessing section, an adaptive histogram equalization enhances dissimilarity between the vessels and the background and morphological top-hat filters are employed to eliminate macula and optic disc, etc. To remove local noise, the difference of images is computed from the top-hat filtered image and the high-boost filtered image. Frangi filter is applied at multi scale for the enhancement of vessels possessing diverse widths. Segmentation is performed by using improved Otsu thresholding on the high-boost filtered image and Frangi's enhanced image, separately. In the postprocessing steps, a Vessel Location Map (VLM) is extracted by using raster to vector transformation. Postprocessing steps are employed in a novel way to reject misclassified vessel pixels. The final segmented image is obtained by using pixel-by-pixel AND operation between VLM and Frangi output image. The method has been rigorously analyzed on the STARE, DRIVE and HRF datasets.
url http://europepmc.org/articles/PMC5809116?pdf=render
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