The first evidence of a new genotype of nephropathogenic infectious bronchitis virus circulating in vaccinated and unvaccinated broiler flocks in Algeria

Background and Aim: Avian infectious bronchitis virus (IBV) frequently infects broilers and is responsible for severe economic losses to the poultry industry worldwide. It has also been associated with kidney damage in the broiler flocks. The aim of the present study is to determine the presence of...

Full description

Bibliographic Details
Main Authors: A. Lounas, K. Oumouna-Benachour, H. Medkour, M. Oumouna
Format: Article
Language:English
Published: Veterinary World 2018-11-01
Series:Veterinary World
Subjects:
Online Access:http://www.veterinaryworld.org/Vol.11/November-2018/17.pdf
id doaj-1927169dcb244f6dbb92f546debf164d
record_format Article
spelling doaj-1927169dcb244f6dbb92f546debf164d2021-08-02T08:59:53ZengVeterinary WorldVeterinary World0972-89882231-09162018-11-0111111630163610.14202/vetworld.2018.1630-1636The first evidence of a new genotype of nephropathogenic infectious bronchitis virus circulating in vaccinated and unvaccinated broiler flocks in AlgeriaA. Lounas0K. Oumouna-Benachour1H. Medkour2M. Oumouna3Department of Medicine and Animal Surgery, Veterinary Sciences Institute, University of Blida, Algeria.Department of natural sciences and life, Faculty of Sciences and Technology, University Yahia Fares of Medea, Algeria.Microbes, Evolution, Phylogeny and Infection, UMR Aix-Marseille University, IRD, APHM, IHU Mediterranee Infection, Marseille, France.Department of natural sciences and life, Faculty of Sciences and Technology, University Yahia Fares of Medea, Algeria.Background and Aim: Avian infectious bronchitis virus (IBV) frequently infects broilers and is responsible for severe economic losses to the poultry industry worldwide. It has also been associated with kidney damage in the broiler flocks. The aim of the present study is to determine the presence of IBV and its possible involvement in kidney damage of broiler chicks. Materials and Methods: 14 clinically diseased broiler flocks from Western and Central Algeria were sampled and analyzed by hemagglutination inhibition (HI) test and reverse transcriptase-polymerase chain reaction (RT-PCR) followed by phylogenic analysis. Results: The QX (100%) and 4/91 (60%) IBV serotypes were the most prevalent in the kidney damaged broilers regardless of vaccination status. The molecular detection of avian IBV by RT-PCR identified six samples as positive, of which only two isolates were typable by sequencing. We identified a novel IBDZ13a genotype which showed 93% sequence homology to the partial-S1 gene sequence of the IB 4/91 commercial vaccine strain. Sequencing analysis characterized this virus as a novel and divergent IB 4/91 field virus with eight amino acid substitutions that might have resulted in altered immunogenicity. Conclusion: The isolation of a new IBV strain (IBDZ13a) from vaccinated broiler flocks may explain the failure of the vaccination programs against IBV field strains. Combination of the HI test and RT-PCR indicated that the nephropathogenic IB outbreaks in broilers are related to this novel strain.http://www.veterinaryworld.org/Vol.11/November-2018/17.pdfavian infectious bronchitis virusbroilerskidney damagesAlgeriahemagglutination inhibition testreverse transcriptase-polymerase chain reactionIBDZ13a
collection DOAJ
language English
format Article
sources DOAJ
author A. Lounas
K. Oumouna-Benachour
H. Medkour
M. Oumouna
spellingShingle A. Lounas
K. Oumouna-Benachour
H. Medkour
M. Oumouna
The first evidence of a new genotype of nephropathogenic infectious bronchitis virus circulating in vaccinated and unvaccinated broiler flocks in Algeria
Veterinary World
avian infectious bronchitis virus
broilers
kidney damages
Algeria
hemagglutination inhibition test
reverse transcriptase-polymerase chain reaction
IBDZ13a
author_facet A. Lounas
K. Oumouna-Benachour
H. Medkour
M. Oumouna
author_sort A. Lounas
title The first evidence of a new genotype of nephropathogenic infectious bronchitis virus circulating in vaccinated and unvaccinated broiler flocks in Algeria
title_short The first evidence of a new genotype of nephropathogenic infectious bronchitis virus circulating in vaccinated and unvaccinated broiler flocks in Algeria
title_full The first evidence of a new genotype of nephropathogenic infectious bronchitis virus circulating in vaccinated and unvaccinated broiler flocks in Algeria
title_fullStr The first evidence of a new genotype of nephropathogenic infectious bronchitis virus circulating in vaccinated and unvaccinated broiler flocks in Algeria
title_full_unstemmed The first evidence of a new genotype of nephropathogenic infectious bronchitis virus circulating in vaccinated and unvaccinated broiler flocks in Algeria
title_sort first evidence of a new genotype of nephropathogenic infectious bronchitis virus circulating in vaccinated and unvaccinated broiler flocks in algeria
publisher Veterinary World
series Veterinary World
issn 0972-8988
2231-0916
publishDate 2018-11-01
description Background and Aim: Avian infectious bronchitis virus (IBV) frequently infects broilers and is responsible for severe economic losses to the poultry industry worldwide. It has also been associated with kidney damage in the broiler flocks. The aim of the present study is to determine the presence of IBV and its possible involvement in kidney damage of broiler chicks. Materials and Methods: 14 clinically diseased broiler flocks from Western and Central Algeria were sampled and analyzed by hemagglutination inhibition (HI) test and reverse transcriptase-polymerase chain reaction (RT-PCR) followed by phylogenic analysis. Results: The QX (100%) and 4/91 (60%) IBV serotypes were the most prevalent in the kidney damaged broilers regardless of vaccination status. The molecular detection of avian IBV by RT-PCR identified six samples as positive, of which only two isolates were typable by sequencing. We identified a novel IBDZ13a genotype which showed 93% sequence homology to the partial-S1 gene sequence of the IB 4/91 commercial vaccine strain. Sequencing analysis characterized this virus as a novel and divergent IB 4/91 field virus with eight amino acid substitutions that might have resulted in altered immunogenicity. Conclusion: The isolation of a new IBV strain (IBDZ13a) from vaccinated broiler flocks may explain the failure of the vaccination programs against IBV field strains. Combination of the HI test and RT-PCR indicated that the nephropathogenic IB outbreaks in broilers are related to this novel strain.
topic avian infectious bronchitis virus
broilers
kidney damages
Algeria
hemagglutination inhibition test
reverse transcriptase-polymerase chain reaction
IBDZ13a
url http://www.veterinaryworld.org/Vol.11/November-2018/17.pdf
work_keys_str_mv AT alounas thefirstevidenceofanewgenotypeofnephropathogenicinfectiousbronchitisviruscirculatinginvaccinatedandunvaccinatedbroilerflocksinalgeria
AT koumounabenachour thefirstevidenceofanewgenotypeofnephropathogenicinfectiousbronchitisviruscirculatinginvaccinatedandunvaccinatedbroilerflocksinalgeria
AT hmedkour thefirstevidenceofanewgenotypeofnephropathogenicinfectiousbronchitisviruscirculatinginvaccinatedandunvaccinatedbroilerflocksinalgeria
AT moumouna thefirstevidenceofanewgenotypeofnephropathogenicinfectiousbronchitisviruscirculatinginvaccinatedandunvaccinatedbroilerflocksinalgeria
AT alounas firstevidenceofanewgenotypeofnephropathogenicinfectiousbronchitisviruscirculatinginvaccinatedandunvaccinatedbroilerflocksinalgeria
AT koumounabenachour firstevidenceofanewgenotypeofnephropathogenicinfectiousbronchitisviruscirculatinginvaccinatedandunvaccinatedbroilerflocksinalgeria
AT hmedkour firstevidenceofanewgenotypeofnephropathogenicinfectiousbronchitisviruscirculatinginvaccinatedandunvaccinatedbroilerflocksinalgeria
AT moumouna firstevidenceofanewgenotypeofnephropathogenicinfectiousbronchitisviruscirculatinginvaccinatedandunvaccinatedbroilerflocksinalgeria
_version_ 1721236691703824384