CellWalker integrates single-cell and bulk data to resolve regulatory elements across cell types in complex tissues

Abstract Single-cell and bulk genomics assays have complementary strengths and weaknesses, and alone neither strategy can fully capture regulatory elements across the diversity of cells in complex tissues. We present CellWalker, a method that integrates single-cell open chromatin (scATAC-seq) data w...

Full description

Bibliographic Details
Main Authors: Pawel F. Przytycki, Katherine S. Pollard
Format: Article
Language:English
Published: BMC 2021-02-01
Series:Genome Biology
Online Access:https://doi.org/10.1186/s13059-021-02279-1