Quantifying multiple-site compositional turnover in an Afrotemperate forest, using zeta diversity

Abstract Background Species turnover is typically measured by partitioning diversity components into alpha and pairwise beta diversity. However, alpha and beta components cannot express the full spectrum of multiple-site compositional turnover. To this end, zeta diversity has been proposed as an ext...

Full description

Bibliographic Details
Main Authors: Cang Hui, Wessel Vermeulen, Graham Durrheim
Format: Article
Language:English
Published: SpringerOpen 2018-02-01
Series:Forest Ecosystems
Subjects:
Online Access:http://link.springer.com/article/10.1186/s40663-018-0135-1
id doaj-18766f6dc72b41fea03ee3e5cbc26d90
record_format Article
spelling doaj-18766f6dc72b41fea03ee3e5cbc26d902020-11-24T23:07:01ZengSpringerOpenForest Ecosystems2197-56202018-02-01511910.1186/s40663-018-0135-1Quantifying multiple-site compositional turnover in an Afrotemperate forest, using zeta diversityCang Hui0Wessel Vermeulen1Graham Durrheim2Centre for Invasion Biology, Department of Mathematical Sciences, Stellenbosch University, MatielandGarden Route Scientific Services, South African National ParksGarden Route Scientific Services, South African National ParksAbstract Background Species turnover is typically measured by partitioning diversity components into alpha and pairwise beta diversity. However, alpha and beta components cannot express the full spectrum of multiple-site compositional turnover. To this end, zeta diversity has been proposed as an extended framework to allow complete biodiversity partitioning and to measure multiple-site species turnover. We use a zeta-diversity framework to explore the turnover and potential community assembly processes of an African Montane Forest. Methods Using a 20 m grid, we explore the species turnover in a 4.55 ha forest plot located in the Garden Route National Park of South Africa, with 47 and 27 canopy and sub-canopy tree species in the regional pool. We first calculate how zeta diversity declines and how the probability of retention of species with particular occupancies changes with increasing zeta orders (i.e. the number of sites [grid cells] involved in the calculation). Using null models with row sums and column sums constrained respectively, we explore whether species turnover is driven by mechanisms of ecological differences (species-specific occupancies) or habitat heterogeneity (site-specific alpha diversity and thus environmental filters). Results The decline of zeta diversity with zeta order followed a power law; that is, the probability of retention increased with species occupancies, suggesting common species being more likely to be discovered in extra sites. The null model retaining row sums (species’ occupancy) of the species-by-site matrix recreated perfectly the decline of zeta diversity, while the null model of habitat heterogeneity (retaining column sums) was rejected. This suggests that mechanisms driving species-specific occupancies (i.e. ecological differences between species) dictate the multi-site species turnover in the community. The spatial patterns of zeta diversity revealed little spatial structuring forces, supporting a fine-grain structure in these southern Cape forests. Conclusions The framework of zeta diversity revealed mechanisms driving the large discrepancies in the occupancy among species that are behind the species turnover in the African Montane forest plot. Future studies could further link species turnover to spatial distance decay. Environmental filters and temporal turnover from landscape demography could bring a cohesive understanding of community assembly in these unique forest ecosystems.http://link.springer.com/article/10.1186/s40663-018-0135-1Species turnoverDiversity partitioningZeta diversityCommunity assemblySouthern cape forestAfromontane forest
collection DOAJ
language English
format Article
sources DOAJ
author Cang Hui
Wessel Vermeulen
Graham Durrheim
spellingShingle Cang Hui
Wessel Vermeulen
Graham Durrheim
Quantifying multiple-site compositional turnover in an Afrotemperate forest, using zeta diversity
Forest Ecosystems
Species turnover
Diversity partitioning
Zeta diversity
Community assembly
Southern cape forest
Afromontane forest
author_facet Cang Hui
Wessel Vermeulen
Graham Durrheim
author_sort Cang Hui
title Quantifying multiple-site compositional turnover in an Afrotemperate forest, using zeta diversity
title_short Quantifying multiple-site compositional turnover in an Afrotemperate forest, using zeta diversity
title_full Quantifying multiple-site compositional turnover in an Afrotemperate forest, using zeta diversity
title_fullStr Quantifying multiple-site compositional turnover in an Afrotemperate forest, using zeta diversity
title_full_unstemmed Quantifying multiple-site compositional turnover in an Afrotemperate forest, using zeta diversity
title_sort quantifying multiple-site compositional turnover in an afrotemperate forest, using zeta diversity
publisher SpringerOpen
series Forest Ecosystems
issn 2197-5620
publishDate 2018-02-01
description Abstract Background Species turnover is typically measured by partitioning diversity components into alpha and pairwise beta diversity. However, alpha and beta components cannot express the full spectrum of multiple-site compositional turnover. To this end, zeta diversity has been proposed as an extended framework to allow complete biodiversity partitioning and to measure multiple-site species turnover. We use a zeta-diversity framework to explore the turnover and potential community assembly processes of an African Montane Forest. Methods Using a 20 m grid, we explore the species turnover in a 4.55 ha forest plot located in the Garden Route National Park of South Africa, with 47 and 27 canopy and sub-canopy tree species in the regional pool. We first calculate how zeta diversity declines and how the probability of retention of species with particular occupancies changes with increasing zeta orders (i.e. the number of sites [grid cells] involved in the calculation). Using null models with row sums and column sums constrained respectively, we explore whether species turnover is driven by mechanisms of ecological differences (species-specific occupancies) or habitat heterogeneity (site-specific alpha diversity and thus environmental filters). Results The decline of zeta diversity with zeta order followed a power law; that is, the probability of retention increased with species occupancies, suggesting common species being more likely to be discovered in extra sites. The null model retaining row sums (species’ occupancy) of the species-by-site matrix recreated perfectly the decline of zeta diversity, while the null model of habitat heterogeneity (retaining column sums) was rejected. This suggests that mechanisms driving species-specific occupancies (i.e. ecological differences between species) dictate the multi-site species turnover in the community. The spatial patterns of zeta diversity revealed little spatial structuring forces, supporting a fine-grain structure in these southern Cape forests. Conclusions The framework of zeta diversity revealed mechanisms driving the large discrepancies in the occupancy among species that are behind the species turnover in the African Montane forest plot. Future studies could further link species turnover to spatial distance decay. Environmental filters and temporal turnover from landscape demography could bring a cohesive understanding of community assembly in these unique forest ecosystems.
topic Species turnover
Diversity partitioning
Zeta diversity
Community assembly
Southern cape forest
Afromontane forest
url http://link.springer.com/article/10.1186/s40663-018-0135-1
work_keys_str_mv AT canghui quantifyingmultiplesitecompositionalturnoverinanafrotemperateforestusingzetadiversity
AT wesselvermeulen quantifyingmultiplesitecompositionalturnoverinanafrotemperateforestusingzetadiversity
AT grahamdurrheim quantifyingmultiplesitecompositionalturnoverinanafrotemperateforestusingzetadiversity
_version_ 1725620591032008704