An open-source k-mer based machine learning tool for fast and accurate subtyping of HIV-1 genomes.

For many disease-causing virus species, global diversity is clustered into a taxonomy of subtypes with clinical significance. In particular, the classification of infections among the subtypes of human immunodeficiency virus type 1 (HIV-1) is a routine component of clinical management, and there are...

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Bibliographic Details
Main Authors: Stephen Solis-Reyes, Mariano Avino, Art Poon, Lila Kari
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2018-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC6235296?pdf=render