sRNAPipe: a Galaxy-based pipeline for bioinformatic in-depth exploration of small RNAseq data

sRNAPipe: a Galaxy-based pipeline for bioinformatic in-depth exploration of small RNAseq data

Abstract Background The field of small RNA is one of the most investigated research areas since they were shown to regulate transposable elements and gene expression and play essential roles in fundamental biological processes. Small RNA deep sequencing (sRNA-seq) is now routinely used for large-sca...

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Bibliographic Details
Main Authors: Romain Pogorelcnik, Chantal Vaury, Pierre Pouchin, Silke Jensen, Emilie Brasset
Format: Article
Language:English
Published: BMC 2018-07-01
Series:Mobile DNA
Subjects:
Small RNA sequencing
sRNA-Seq
Galaxy
Bioinformatics analyses
Pipeline
Online Access:http://link.springer.com/article/10.1186/s13100-018-0130-7

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