Mating system evolution and genetic structure of diploid sexual populations of Cyrtomium falcatum in Japan

Abstract Evolution of mating systems has become one of the most important research areas in evolutionary biology. Cyrtomium falcatum is a homosporous fern species native to eastern Asia. Two subspecies belonging to a sexual diploid race of C. falcatum are recognized: subsp. littorale and subsp. aust...

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Main Authors: Ryosuke Imai, Yoshiaki Tsuda, Atsushi Ebihara, Sadamu Matsumoto, Ayumi Tezuka, Atsushi J. Nagano, Ryo Ootsuki, Yasuyuki Watano
Format: Article
Language:English
Published: Nature Publishing Group 2021-02-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-021-82731-1
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spelling doaj-176b2798d97740b3b6bca4072e4a15d12021-02-07T12:36:45ZengNature Publishing GroupScientific Reports2045-23222021-02-0111111210.1038/s41598-021-82731-1Mating system evolution and genetic structure of diploid sexual populations of Cyrtomium falcatum in JapanRyosuke Imai0Yoshiaki Tsuda1Atsushi Ebihara2Sadamu Matsumoto3Ayumi Tezuka4Atsushi J. Nagano5Ryo Ootsuki6Yasuyuki Watano7Sugadaira Research Station, Mountain Science Center, University of TsukubaSugadaira Research Station, Mountain Science Center, University of TsukubaDepartment of Botany, National Museum of Nature and ScienceDepartment of Botany, National Museum of Nature and ScienceFaculty of Agriculture, Ryukoku UniversityFaculty of Agriculture, Ryukoku UniversityDepartment of Natural Sciences, Faculty of Arts and Sciences, Komazawa UniversityDepartment of Biology, Graduate School of Science, Chiba UniversityAbstract Evolution of mating systems has become one of the most important research areas in evolutionary biology. Cyrtomium falcatum is a homosporous fern species native to eastern Asia. Two subspecies belonging to a sexual diploid race of C. falcatum are recognized: subsp. littorale and subsp. australe. Subspecies littorale shows intermediate selfing rates, while subsp. australe is an obligate outcrosser. We aimed to evaluate the process of mating system evolution and divergence for the two subspecies using restriction site associated DNA sequencing (RAD-seq). The results showed that subsp. littorale had lower genetic diversity and stronger genetic drift than subsp. australe. Fluctuations in the effective population size over time were evaluated by extended Bayesian skyline plot and Stairway plot analyses, both of which revealed a severe population bottleneck about 20,000 years ago in subsp. littorale. This bottleneck and the subsequent range expansion after the LGM appear to have played an important role in the divergence of the two subspecies and the evolution of selfing in subsp. littorale. These results shed new light on the relationship between mating system evolution and past demographic change in fern species.https://doi.org/10.1038/s41598-021-82731-1
collection DOAJ
language English
format Article
sources DOAJ
author Ryosuke Imai
Yoshiaki Tsuda
Atsushi Ebihara
Sadamu Matsumoto
Ayumi Tezuka
Atsushi J. Nagano
Ryo Ootsuki
Yasuyuki Watano
spellingShingle Ryosuke Imai
Yoshiaki Tsuda
Atsushi Ebihara
Sadamu Matsumoto
Ayumi Tezuka
Atsushi J. Nagano
Ryo Ootsuki
Yasuyuki Watano
Mating system evolution and genetic structure of diploid sexual populations of Cyrtomium falcatum in Japan
Scientific Reports
author_facet Ryosuke Imai
Yoshiaki Tsuda
Atsushi Ebihara
Sadamu Matsumoto
Ayumi Tezuka
Atsushi J. Nagano
Ryo Ootsuki
Yasuyuki Watano
author_sort Ryosuke Imai
title Mating system evolution and genetic structure of diploid sexual populations of Cyrtomium falcatum in Japan
title_short Mating system evolution and genetic structure of diploid sexual populations of Cyrtomium falcatum in Japan
title_full Mating system evolution and genetic structure of diploid sexual populations of Cyrtomium falcatum in Japan
title_fullStr Mating system evolution and genetic structure of diploid sexual populations of Cyrtomium falcatum in Japan
title_full_unstemmed Mating system evolution and genetic structure of diploid sexual populations of Cyrtomium falcatum in Japan
title_sort mating system evolution and genetic structure of diploid sexual populations of cyrtomium falcatum in japan
publisher Nature Publishing Group
series Scientific Reports
issn 2045-2322
publishDate 2021-02-01
description Abstract Evolution of mating systems has become one of the most important research areas in evolutionary biology. Cyrtomium falcatum is a homosporous fern species native to eastern Asia. Two subspecies belonging to a sexual diploid race of C. falcatum are recognized: subsp. littorale and subsp. australe. Subspecies littorale shows intermediate selfing rates, while subsp. australe is an obligate outcrosser. We aimed to evaluate the process of mating system evolution and divergence for the two subspecies using restriction site associated DNA sequencing (RAD-seq). The results showed that subsp. littorale had lower genetic diversity and stronger genetic drift than subsp. australe. Fluctuations in the effective population size over time were evaluated by extended Bayesian skyline plot and Stairway plot analyses, both of which revealed a severe population bottleneck about 20,000 years ago in subsp. littorale. This bottleneck and the subsequent range expansion after the LGM appear to have played an important role in the divergence of the two subspecies and the evolution of selfing in subsp. littorale. These results shed new light on the relationship between mating system evolution and past demographic change in fern species.
url https://doi.org/10.1038/s41598-021-82731-1
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