Implementation of cylindrical PET scanners with block detector geometry in STIR
Abstract Background Software for Tomographic Image Reconstruction (STIR) is an open-source library for PET and SPECT image reconstruction, implementing iterative reconstruction as well as 2D- and 3D-filtered back projection. Quantitative reconstruction of PET data requires the knowledge of the scann...
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doaj-15d812ca79244fffb3a9f81a13ddd2fe2020-11-25T03:35:35ZengSpringerOpenEJNMMI Physics2197-73642019-07-016112010.1186/s40658-019-0248-9Implementation of cylindrical PET scanners with block detector geometry in STIRParisa Khateri0Jannis Fischer1Werner Lustermann2Charalampos Tsoumpas3Günther Dissertori4Institute for Particle Physics and Astrophysics, Department of Physics, ETH ZürichInstitute for Particle Physics and Astrophysics, Department of Physics, ETH ZürichInstitute for Particle Physics and Astrophysics, Department of Physics, ETH ZürichLeeds Institute of Cardiovascular and Metabolic Medicine, University of LeedsInstitute for Particle Physics and Astrophysics, Department of Physics, ETH ZürichAbstract Background Software for Tomographic Image Reconstruction (STIR) is an open-source library for PET and SPECT image reconstruction, implementing iterative reconstruction as well as 2D- and 3D-filtered back projection. Quantitative reconstruction of PET data requires the knowledge of the scanner geometry. Typical scanners, clinical as well as pre-clinical ones, use a block-type geometry. Several rectangular blocks of crystals are arranged into regular polygons. Multiple of such polygons are arranged along the scanner axis. However, the geometrical representation of a scanner provided by STIR is a cylinder made of rings of individual crystals equally distributed in axial and transaxial directions. The data of realistic scanners are projected onto such virtual scanners prior to image reconstruction. This results in reduced quality of the reconstructed image. In this study, we implemented the above-described block geometry into the STIR library, permitting the image reconstruction without the interpolation step. In order to evaluate the difference in image quality, we performed Monte Carlo simulation studies of three different scanner designs: two scanners with multiple crystals per block and one with a single crystal per block. Simulated data were reconstructed using the standard STIR method and the newly implemented block geometry. Results Visual comparison between the images reconstructed by the two models for the block-type scanners shows that the new implementation enhances the image quality to the extent that the results before normalization correction are comparable with those after normalization correction. The simulation result of a uniform cylinder shows that the coefficient of variation decreases from 25.8% to 20.9% by using the new implementation in STIR. Spatial resolution is enhanced resulting in a lower partial loss of intensity in sources of small size, e.g., the spill-over ratio for spherical sources of 1.8 mm diameter is 0.19 in the block and 0.34 in the cylindrical model. Conclusions Results indicate a significant improvement for the new model in comparison with the old one which mapped the polygonal geometry into a cylinder. The new implementation was tested and is available for use via the library of Swiss Federal Institute of Technology in Zurich (ETH).http://link.springer.com/article/10.1186/s40658-019-0248-9PET image reconstructionSAFIRScanner geometrySTIR |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Parisa Khateri Jannis Fischer Werner Lustermann Charalampos Tsoumpas Günther Dissertori |
spellingShingle |
Parisa Khateri Jannis Fischer Werner Lustermann Charalampos Tsoumpas Günther Dissertori Implementation of cylindrical PET scanners with block detector geometry in STIR EJNMMI Physics PET image reconstruction SAFIR Scanner geometry STIR |
author_facet |
Parisa Khateri Jannis Fischer Werner Lustermann Charalampos Tsoumpas Günther Dissertori |
author_sort |
Parisa Khateri |
title |
Implementation of cylindrical PET scanners with block detector geometry in STIR |
title_short |
Implementation of cylindrical PET scanners with block detector geometry in STIR |
title_full |
Implementation of cylindrical PET scanners with block detector geometry in STIR |
title_fullStr |
Implementation of cylindrical PET scanners with block detector geometry in STIR |
title_full_unstemmed |
Implementation of cylindrical PET scanners with block detector geometry in STIR |
title_sort |
implementation of cylindrical pet scanners with block detector geometry in stir |
publisher |
SpringerOpen |
series |
EJNMMI Physics |
issn |
2197-7364 |
publishDate |
2019-07-01 |
description |
Abstract Background Software for Tomographic Image Reconstruction (STIR) is an open-source library for PET and SPECT image reconstruction, implementing iterative reconstruction as well as 2D- and 3D-filtered back projection. Quantitative reconstruction of PET data requires the knowledge of the scanner geometry. Typical scanners, clinical as well as pre-clinical ones, use a block-type geometry. Several rectangular blocks of crystals are arranged into regular polygons. Multiple of such polygons are arranged along the scanner axis. However, the geometrical representation of a scanner provided by STIR is a cylinder made of rings of individual crystals equally distributed in axial and transaxial directions. The data of realistic scanners are projected onto such virtual scanners prior to image reconstruction. This results in reduced quality of the reconstructed image. In this study, we implemented the above-described block geometry into the STIR library, permitting the image reconstruction without the interpolation step. In order to evaluate the difference in image quality, we performed Monte Carlo simulation studies of three different scanner designs: two scanners with multiple crystals per block and one with a single crystal per block. Simulated data were reconstructed using the standard STIR method and the newly implemented block geometry. Results Visual comparison between the images reconstructed by the two models for the block-type scanners shows that the new implementation enhances the image quality to the extent that the results before normalization correction are comparable with those after normalization correction. The simulation result of a uniform cylinder shows that the coefficient of variation decreases from 25.8% to 20.9% by using the new implementation in STIR. Spatial resolution is enhanced resulting in a lower partial loss of intensity in sources of small size, e.g., the spill-over ratio for spherical sources of 1.8 mm diameter is 0.19 in the block and 0.34 in the cylindrical model. Conclusions Results indicate a significant improvement for the new model in comparison with the old one which mapped the polygonal geometry into a cylinder. The new implementation was tested and is available for use via the library of Swiss Federal Institute of Technology in Zurich (ETH). |
topic |
PET image reconstruction SAFIR Scanner geometry STIR |
url |
http://link.springer.com/article/10.1186/s40658-019-0248-9 |
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1724553587396182016 |