Deep Learning for Prediction of Diaphragm Activity from the Surface Electromyogram
The electrical activity of the diaphragm (EAdi) is a novel monitoring parameter for patients under assisted ventilation and is used for assessing the patient’s neural respiratory drive. It is recorded by an array of electrodes placed inside the esophagus at the level of the diaphragm. A noninvasive...
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doaj-13a0b43939d44e58b96eb18f93a1cddf2021-09-06T19:19:27ZengDe GruyterCurrent Directions in Biomedical Engineering2364-55042019-09-0151172010.1515/cdbme-2019-0005cdbme-2019-0005Deep Learning for Prediction of Diaphragm Activity from the Surface ElectromyogramBockelmann Niclas0Graßhoff Jan1Hansen Lasse2Bellani Giacomo3Heinrich Mattias P.4Rostalski Philipp5Institute for Electrical Engineering in Medicine, Universitat zu Lübeck, Lübeck,Schleswig-Holstein, GermanyInstitute for Electrical Engineering in Medicine, Universitat zu Lübeck, Lübeck,Schleswig-Holstein, GermanyInstitute of Medical Informatics, Universitat zu Lübeck, Lübeck,Schleswig-Holstein, GermanyUniversita degli Studi Milano Bicocca, Dipartimento di Medicina e Chirurgia,Milano, ItalyInstitute of Medical Informatics, Universitat zu Lübeck, Lübeck,Schleswig-Holstein, GermanyInstitute for Electrical Engineering in Medicine, Universitat zu Lübeck, Lübeck,Schleswig-Holstein, GermanyThe electrical activity of the diaphragm (EAdi) is a novel monitoring parameter for patients under assisted ventilation and is used for assessing the patient’s neural respiratory drive. It is recorded by an array of electrodes placed inside the esophagus at the level of the diaphragm. A noninvasive alternative is the measurement of the electromyogram by means of skin surface electrodes (sEMG). The respiratory sEMG signal, however, is subject to electrocardiographic interference and crosstalk from other muscles and may also pick up a different part of the muscular activity. In this work, we propose to use a deep neural network to predict the electrical activity of the diaphragm as measured by a nasogastric catheter from sEMG measurements. We use a ResNet based architecture and train the network to directly regress the EAdi as a supervised learning task - we further investigate a heatmap based regression approach. The proposed methods are evaluated on a clinical dataset consisting of 77 recordings from mechanically ventilated patients. For the direct regression task, the network’s predictions reach a Pearson correlation coefficient (PCC) of 0.818 with EAdi on the hold-out set. The heatmap regression increases the PCC to 0.830 while at the same time achieving a lower mean absolute error, indicating a superior performance. From our results we conclude that sEMG measurements may be used to predict the internal activity of the diaphragm as measured invasively using a nasogastric catheter.https://doi.org/10.1515/cdbme-2019-0005diaphragm activitysemgdeep learning |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Bockelmann Niclas Graßhoff Jan Hansen Lasse Bellani Giacomo Heinrich Mattias P. Rostalski Philipp |
spellingShingle |
Bockelmann Niclas Graßhoff Jan Hansen Lasse Bellani Giacomo Heinrich Mattias P. Rostalski Philipp Deep Learning for Prediction of Diaphragm Activity from the Surface Electromyogram Current Directions in Biomedical Engineering diaphragm activity semg deep learning |
author_facet |
Bockelmann Niclas Graßhoff Jan Hansen Lasse Bellani Giacomo Heinrich Mattias P. Rostalski Philipp |
author_sort |
Bockelmann Niclas |
title |
Deep Learning for Prediction of Diaphragm Activity from the Surface Electromyogram |
title_short |
Deep Learning for Prediction of Diaphragm Activity from the Surface Electromyogram |
title_full |
Deep Learning for Prediction of Diaphragm Activity from the Surface Electromyogram |
title_fullStr |
Deep Learning for Prediction of Diaphragm Activity from the Surface Electromyogram |
title_full_unstemmed |
Deep Learning for Prediction of Diaphragm Activity from the Surface Electromyogram |
title_sort |
deep learning for prediction of diaphragm activity from the surface electromyogram |
publisher |
De Gruyter |
series |
Current Directions in Biomedical Engineering |
issn |
2364-5504 |
publishDate |
2019-09-01 |
description |
The electrical activity of the diaphragm (EAdi) is a novel monitoring parameter for patients under assisted ventilation and is used for assessing the patient’s neural respiratory drive. It is recorded by an array of electrodes placed inside the esophagus at the level of the diaphragm. A noninvasive alternative is the measurement of the electromyogram by means of skin surface electrodes (sEMG). The respiratory sEMG signal, however, is subject to electrocardiographic interference and crosstalk from other muscles and may also pick up a different part of the muscular activity. In this work, we propose to use a deep neural network to predict the electrical activity of the diaphragm as measured by a nasogastric catheter from sEMG measurements. We use a ResNet based architecture and train the network to directly regress the EAdi as a supervised learning task - we further investigate a heatmap based regression approach. The proposed methods are evaluated on a clinical dataset consisting of 77 recordings from mechanically ventilated patients. For the direct regression task, the network’s predictions reach a Pearson correlation coefficient (PCC) of 0.818 with EAdi on the hold-out set. The heatmap regression increases the PCC to 0.830 while at the same time achieving a lower mean absolute error, indicating a superior performance. From our results we conclude that sEMG measurements may be used to predict the internal activity of the diaphragm as measured invasively using a nasogastric catheter. |
topic |
diaphragm activity semg deep learning |
url |
https://doi.org/10.1515/cdbme-2019-0005 |
work_keys_str_mv |
AT bockelmannniclas deeplearningforpredictionofdiaphragmactivityfromthesurfaceelectromyogram AT graßhoffjan deeplearningforpredictionofdiaphragmactivityfromthesurfaceelectromyogram AT hansenlasse deeplearningforpredictionofdiaphragmactivityfromthesurfaceelectromyogram AT bellanigiacomo deeplearningforpredictionofdiaphragmactivityfromthesurfaceelectromyogram AT heinrichmattiasp deeplearningforpredictionofdiaphragmactivityfromthesurfaceelectromyogram AT rostalskiphilipp deeplearningforpredictionofdiaphragmactivityfromthesurfaceelectromyogram |
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1717778464417775616 |