Deep Learning for Prediction of Diaphragm Activity from the Surface Electromyogram

The electrical activity of the diaphragm (EAdi) is a novel monitoring parameter for patients under assisted ventilation and is used for assessing the patient’s neural respiratory drive. It is recorded by an array of electrodes placed inside the esophagus at the level of the diaphragm. A noninvasive...

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Main Authors: Bockelmann Niclas, Graßhoff Jan, Hansen Lasse, Bellani Giacomo, Heinrich Mattias P., Rostalski Philipp
Format: Article
Language:English
Published: De Gruyter 2019-09-01
Series:Current Directions in Biomedical Engineering
Subjects:
Online Access:https://doi.org/10.1515/cdbme-2019-0005
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spelling doaj-13a0b43939d44e58b96eb18f93a1cddf2021-09-06T19:19:27ZengDe GruyterCurrent Directions in Biomedical Engineering2364-55042019-09-0151172010.1515/cdbme-2019-0005cdbme-2019-0005Deep Learning for Prediction of Diaphragm Activity from the Surface ElectromyogramBockelmann Niclas0Graßhoff Jan1Hansen Lasse2Bellani Giacomo3Heinrich Mattias P.4Rostalski Philipp5Institute for Electrical Engineering in Medicine, Universitat zu Lübeck, Lübeck,Schleswig-Holstein, GermanyInstitute for Electrical Engineering in Medicine, Universitat zu Lübeck, Lübeck,Schleswig-Holstein, GermanyInstitute of Medical Informatics, Universitat zu Lübeck, Lübeck,Schleswig-Holstein, GermanyUniversita degli Studi Milano Bicocca, Dipartimento di Medicina e Chirurgia,Milano, ItalyInstitute of Medical Informatics, Universitat zu Lübeck, Lübeck,Schleswig-Holstein, GermanyInstitute for Electrical Engineering in Medicine, Universitat zu Lübeck, Lübeck,Schleswig-Holstein, GermanyThe electrical activity of the diaphragm (EAdi) is a novel monitoring parameter for patients under assisted ventilation and is used for assessing the patient’s neural respiratory drive. It is recorded by an array of electrodes placed inside the esophagus at the level of the diaphragm. A noninvasive alternative is the measurement of the electromyogram by means of skin surface electrodes (sEMG). The respiratory sEMG signal, however, is subject to electrocardiographic interference and crosstalk from other muscles and may also pick up a different part of the muscular activity. In this work, we propose to use a deep neural network to predict the electrical activity of the diaphragm as measured by a nasogastric catheter from sEMG measurements. We use a ResNet based architecture and train the network to directly regress the EAdi as a supervised learning task - we further investigate a heatmap based regression approach. The proposed methods are evaluated on a clinical dataset consisting of 77 recordings from mechanically ventilated patients. For the direct regression task, the network’s predictions reach a Pearson correlation coefficient (PCC) of 0.818 with EAdi on the hold-out set. The heatmap regression increases the PCC to 0.830 while at the same time achieving a lower mean absolute error, indicating a superior performance. From our results we conclude that sEMG measurements may be used to predict the internal activity of the diaphragm as measured invasively using a nasogastric catheter.https://doi.org/10.1515/cdbme-2019-0005diaphragm activitysemgdeep learning
collection DOAJ
language English
format Article
sources DOAJ
author Bockelmann Niclas
Graßhoff Jan
Hansen Lasse
Bellani Giacomo
Heinrich Mattias P.
Rostalski Philipp
spellingShingle Bockelmann Niclas
Graßhoff Jan
Hansen Lasse
Bellani Giacomo
Heinrich Mattias P.
Rostalski Philipp
Deep Learning for Prediction of Diaphragm Activity from the Surface Electromyogram
Current Directions in Biomedical Engineering
diaphragm activity
semg
deep learning
author_facet Bockelmann Niclas
Graßhoff Jan
Hansen Lasse
Bellani Giacomo
Heinrich Mattias P.
Rostalski Philipp
author_sort Bockelmann Niclas
title Deep Learning for Prediction of Diaphragm Activity from the Surface Electromyogram
title_short Deep Learning for Prediction of Diaphragm Activity from the Surface Electromyogram
title_full Deep Learning for Prediction of Diaphragm Activity from the Surface Electromyogram
title_fullStr Deep Learning for Prediction of Diaphragm Activity from the Surface Electromyogram
title_full_unstemmed Deep Learning for Prediction of Diaphragm Activity from the Surface Electromyogram
title_sort deep learning for prediction of diaphragm activity from the surface electromyogram
publisher De Gruyter
series Current Directions in Biomedical Engineering
issn 2364-5504
publishDate 2019-09-01
description The electrical activity of the diaphragm (EAdi) is a novel monitoring parameter for patients under assisted ventilation and is used for assessing the patient’s neural respiratory drive. It is recorded by an array of electrodes placed inside the esophagus at the level of the diaphragm. A noninvasive alternative is the measurement of the electromyogram by means of skin surface electrodes (sEMG). The respiratory sEMG signal, however, is subject to electrocardiographic interference and crosstalk from other muscles and may also pick up a different part of the muscular activity. In this work, we propose to use a deep neural network to predict the electrical activity of the diaphragm as measured by a nasogastric catheter from sEMG measurements. We use a ResNet based architecture and train the network to directly regress the EAdi as a supervised learning task - we further investigate a heatmap based regression approach. The proposed methods are evaluated on a clinical dataset consisting of 77 recordings from mechanically ventilated patients. For the direct regression task, the network’s predictions reach a Pearson correlation coefficient (PCC) of 0.818 with EAdi on the hold-out set. The heatmap regression increases the PCC to 0.830 while at the same time achieving a lower mean absolute error, indicating a superior performance. From our results we conclude that sEMG measurements may be used to predict the internal activity of the diaphragm as measured invasively using a nasogastric catheter.
topic diaphragm activity
semg
deep learning
url https://doi.org/10.1515/cdbme-2019-0005
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AT bellanigiacomo deeplearningforpredictionofdiaphragmactivityfromthesurfaceelectromyogram
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