Wavelet-based Gaussian-mixture hidden Markov model for the detection of multistage seizure dynamics: A proof-of-concept study

<p>Abstract</p> <p>Background</p> <p>Epilepsy is a common neurological disorder characterized by recurrent electrophysiological activities, known as seizures. Without the appropriate detection strategies, these seizure episodes can dramatically affect the quality of lif...

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Main Authors: Carlen Peter L, Cotic Marija, Derchansky Miron, Chiu Alan WL, Turner Steuart O, Bardakjian Berj L
Format: Article
Language:English
Published: BMC 2011-04-01
Series:BioMedical Engineering OnLine
Online Access:http://www.biomedical-engineering-online.com/content/10/1/29
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spelling doaj-11ff0f14db3741208c3893442114645a2020-11-24T22:20:19ZengBMCBioMedical Engineering OnLine1475-925X2011-04-011012910.1186/1475-925X-10-29Wavelet-based Gaussian-mixture hidden Markov model for the detection of multistage seizure dynamics: A proof-of-concept studyCarlen Peter LCotic MarijaDerchansky MironChiu Alan WLTurner Steuart OBardakjian Berj L<p>Abstract</p> <p>Background</p> <p>Epilepsy is a common neurological disorder characterized by recurrent electrophysiological activities, known as seizures. Without the appropriate detection strategies, these seizure episodes can dramatically affect the quality of life for those afflicted. The rationale of this study is to develop an unsupervised algorithm for the detection of seizure states so that it may be implemented along with potential intervention strategies.</p> <p>Methods</p> <p>Hidden Markov model (HMM) was developed to interpret the state transitions of the <it>in vitro </it>rat hippocampal slice local field potentials (LFPs) during seizure episodes. It can be used to estimate the probability of state transitions and the corresponding characteristics of each state. Wavelet features were clustered and used to differentiate the electrophysiological characteristics at each corresponding HMM states. Using unsupervised training method, the HMM and the clustering parameters were obtained simultaneously. The HMM states were then assigned to the electrophysiological data using expert guided technique. Minimum redundancy maximum relevance (mRMR) analysis and Akaike Information Criterion (AICc) were applied to reduce the effect of over-fitting. The sensitivity, specificity and optimality index of chronic seizure detection were compared for various HMM topologies. The ability of distinguishing early and late tonic firing patterns prior to chronic seizures were also evaluated.</p> <p>Results</p> <p>Significant improvement in state detection performance was achieved when additional wavelet coefficient rates of change information were used as features. The final HMM topology obtained using mRMR and AICc was able to detect non-ictal (interictal), early and late tonic firing, chronic seizures and postictal activities. A mean sensitivity of 95.7%, mean specificity of 98.9% and optimality index of 0.995 in the detection of chronic seizures was achieved. The detection of early and late tonic firing was validated with experimental intracellular electrical recordings of seizures.</p> <p>Conclusions</p> <p>The HMM implementation of a seizure dynamics detector is an improvement over existing approaches using visual detection and complexity measures. The subjectivity involved in partitioning the observed data prior to training can be eliminated. It can also decipher the probabilities of seizure state transitions using the magnitude and rate of change wavelet information of the LFPs.</p> http://www.biomedical-engineering-online.com/content/10/1/29
collection DOAJ
language English
format Article
sources DOAJ
author Carlen Peter L
Cotic Marija
Derchansky Miron
Chiu Alan WL
Turner Steuart O
Bardakjian Berj L
spellingShingle Carlen Peter L
Cotic Marija
Derchansky Miron
Chiu Alan WL
Turner Steuart O
Bardakjian Berj L
Wavelet-based Gaussian-mixture hidden Markov model for the detection of multistage seizure dynamics: A proof-of-concept study
BioMedical Engineering OnLine
author_facet Carlen Peter L
Cotic Marija
Derchansky Miron
Chiu Alan WL
Turner Steuart O
Bardakjian Berj L
author_sort Carlen Peter L
title Wavelet-based Gaussian-mixture hidden Markov model for the detection of multistage seizure dynamics: A proof-of-concept study
title_short Wavelet-based Gaussian-mixture hidden Markov model for the detection of multistage seizure dynamics: A proof-of-concept study
title_full Wavelet-based Gaussian-mixture hidden Markov model for the detection of multistage seizure dynamics: A proof-of-concept study
title_fullStr Wavelet-based Gaussian-mixture hidden Markov model for the detection of multistage seizure dynamics: A proof-of-concept study
title_full_unstemmed Wavelet-based Gaussian-mixture hidden Markov model for the detection of multistage seizure dynamics: A proof-of-concept study
title_sort wavelet-based gaussian-mixture hidden markov model for the detection of multistage seizure dynamics: a proof-of-concept study
publisher BMC
series BioMedical Engineering OnLine
issn 1475-925X
publishDate 2011-04-01
description <p>Abstract</p> <p>Background</p> <p>Epilepsy is a common neurological disorder characterized by recurrent electrophysiological activities, known as seizures. Without the appropriate detection strategies, these seizure episodes can dramatically affect the quality of life for those afflicted. The rationale of this study is to develop an unsupervised algorithm for the detection of seizure states so that it may be implemented along with potential intervention strategies.</p> <p>Methods</p> <p>Hidden Markov model (HMM) was developed to interpret the state transitions of the <it>in vitro </it>rat hippocampal slice local field potentials (LFPs) during seizure episodes. It can be used to estimate the probability of state transitions and the corresponding characteristics of each state. Wavelet features were clustered and used to differentiate the electrophysiological characteristics at each corresponding HMM states. Using unsupervised training method, the HMM and the clustering parameters were obtained simultaneously. The HMM states were then assigned to the electrophysiological data using expert guided technique. Minimum redundancy maximum relevance (mRMR) analysis and Akaike Information Criterion (AICc) were applied to reduce the effect of over-fitting. The sensitivity, specificity and optimality index of chronic seizure detection were compared for various HMM topologies. The ability of distinguishing early and late tonic firing patterns prior to chronic seizures were also evaluated.</p> <p>Results</p> <p>Significant improvement in state detection performance was achieved when additional wavelet coefficient rates of change information were used as features. The final HMM topology obtained using mRMR and AICc was able to detect non-ictal (interictal), early and late tonic firing, chronic seizures and postictal activities. A mean sensitivity of 95.7%, mean specificity of 98.9% and optimality index of 0.995 in the detection of chronic seizures was achieved. The detection of early and late tonic firing was validated with experimental intracellular electrical recordings of seizures.</p> <p>Conclusions</p> <p>The HMM implementation of a seizure dynamics detector is an improvement over existing approaches using visual detection and complexity measures. The subjectivity involved in partitioning the observed data prior to training can be eliminated. It can also decipher the probabilities of seizure state transitions using the magnitude and rate of change wavelet information of the LFPs.</p>
url http://www.biomedical-engineering-online.com/content/10/1/29
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