Label-free RNA-based electrochemical nanobiosensor for detection of Hepatitis C

In this study, an ultrasensitive label-free nanobiosensor for detecting the Hepatitis C virus (HCV) RNA was fabricated, without the need for target denaturation, by using an RNA oligomer as a probe. The biosensor was prepared by electrodeposition of the copper oxide (Cu2O) and gold nanoparticles (Au...

Full description

Bibliographic Details
Main Authors: Atie Roohizadeh, Ali Ghaffarinejad, Razieh Salahandish, Eskandar Omidinia
Format: Article
Language:English
Published: Elsevier 2020-11-01
Series:Current Research in Biotechnology
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2590262820300198
id doaj-1091dd2b84434ca58a1277c606efbb45
record_format Article
spelling doaj-1091dd2b84434ca58a1277c606efbb452021-02-27T04:40:31ZengElsevierCurrent Research in Biotechnology2590-26282020-11-012187192Label-free RNA-based electrochemical nanobiosensor for detection of Hepatitis CAtie Roohizadeh0Ali Ghaffarinejad1Razieh Salahandish2Eskandar Omidinia3Research Laboratory of Real Samples Analysis, Faculty of Chemistry, Iran University of Science and Technology (IUST), Tehran 1684613114, IranResearch Laboratory of Real Samples Analysis, Faculty of Chemistry, Iran University of Science and Technology (IUST), Tehran 1684613114, Iran; Electroanalytical Chemistry Research Center, Iran University of Science and Technology (IUST), Tehran 1684613114, Iran; Corresponding authors at: Research Laboratory of Real Samples Analysis, Faculty of Chemistry, Iran University of Science and Technology (IUST), Tehran 1684613114, Iran (A. Ghaffarinejad).Research Laboratory of Real Samples Analysis, Faculty of Chemistry, Iran University of Science and Technology (IUST), Tehran 1684613114, IranDepartment of Biochemistry, Genetics and Metabolism Research Group, Pasteur Institute of Iran, Tehran, Iran; Corresponding authors at: Research Laboratory of Real Samples Analysis, Faculty of Chemistry, Iran University of Science and Technology (IUST), Tehran 1684613114, Iran (A. Ghaffarinejad).In this study, an ultrasensitive label-free nanobiosensor for detecting the Hepatitis C virus (HCV) RNA was fabricated, without the need for target denaturation, by using an RNA oligomer as a probe. The biosensor was prepared by electrodeposition of the copper oxide (Cu2O) and gold nanoparticles (AuNPs) on the nitrogen-doped graphene (NG) coated fluorine-doped tin oxide electrode (FTOE). The thiolated complementary probe of RNA virus was adsorbed on the AuNPS through monolayer self-assembly (SAM), after that, the RNA target of HCV virus binds to its complementary sequence which leads to a significant change in differential pulse voltammetry (DPV) response of the probe in the presence of Fe(CN)63−/4− as redox sensing probe. Various important parameters were optimized and at optimum conditions, the nanobiosensor had a wide dynamic range (1 × 10−15–1 × 10−6 mol. L−1) with a very low detection limit of 1 × 10−15 mol. L−1. The biosensor was successfully evaluated in the blood real samples and according to its good selectivity, wide linear range, acceptable reproducibility, and repeatability; the proposed biosensor has a suitable ability for detection of the HCV RNA in clinical applications.http://www.sciencedirect.com/science/article/pii/S2590262820300198Hepatitis CNitrogen-doped grapheneCopper oxideAu nanoparticlesElectrochemical RNA-based sensor
collection DOAJ
language English
format Article
sources DOAJ
author Atie Roohizadeh
Ali Ghaffarinejad
Razieh Salahandish
Eskandar Omidinia
spellingShingle Atie Roohizadeh
Ali Ghaffarinejad
Razieh Salahandish
Eskandar Omidinia
Label-free RNA-based electrochemical nanobiosensor for detection of Hepatitis C
Current Research in Biotechnology
Hepatitis C
Nitrogen-doped graphene
Copper oxide
Au nanoparticles
Electrochemical RNA-based sensor
author_facet Atie Roohizadeh
Ali Ghaffarinejad
Razieh Salahandish
Eskandar Omidinia
author_sort Atie Roohizadeh
title Label-free RNA-based electrochemical nanobiosensor for detection of Hepatitis C
title_short Label-free RNA-based electrochemical nanobiosensor for detection of Hepatitis C
title_full Label-free RNA-based electrochemical nanobiosensor for detection of Hepatitis C
title_fullStr Label-free RNA-based electrochemical nanobiosensor for detection of Hepatitis C
title_full_unstemmed Label-free RNA-based electrochemical nanobiosensor for detection of Hepatitis C
title_sort label-free rna-based electrochemical nanobiosensor for detection of hepatitis c
publisher Elsevier
series Current Research in Biotechnology
issn 2590-2628
publishDate 2020-11-01
description In this study, an ultrasensitive label-free nanobiosensor for detecting the Hepatitis C virus (HCV) RNA was fabricated, without the need for target denaturation, by using an RNA oligomer as a probe. The biosensor was prepared by electrodeposition of the copper oxide (Cu2O) and gold nanoparticles (AuNPs) on the nitrogen-doped graphene (NG) coated fluorine-doped tin oxide electrode (FTOE). The thiolated complementary probe of RNA virus was adsorbed on the AuNPS through monolayer self-assembly (SAM), after that, the RNA target of HCV virus binds to its complementary sequence which leads to a significant change in differential pulse voltammetry (DPV) response of the probe in the presence of Fe(CN)63−/4− as redox sensing probe. Various important parameters were optimized and at optimum conditions, the nanobiosensor had a wide dynamic range (1 × 10−15–1 × 10−6 mol. L−1) with a very low detection limit of 1 × 10−15 mol. L−1. The biosensor was successfully evaluated in the blood real samples and according to its good selectivity, wide linear range, acceptable reproducibility, and repeatability; the proposed biosensor has a suitable ability for detection of the HCV RNA in clinical applications.
topic Hepatitis C
Nitrogen-doped graphene
Copper oxide
Au nanoparticles
Electrochemical RNA-based sensor
url http://www.sciencedirect.com/science/article/pii/S2590262820300198
work_keys_str_mv AT atieroohizadeh labelfreernabasedelectrochemicalnanobiosensorfordetectionofhepatitisc
AT alighaffarinejad labelfreernabasedelectrochemicalnanobiosensorfordetectionofhepatitisc
AT raziehsalahandish labelfreernabasedelectrochemicalnanobiosensorfordetectionofhepatitisc
AT eskandaromidinia labelfreernabasedelectrochemicalnanobiosensorfordetectionofhepatitisc
_version_ 1724248343224254464