Tm-Shift Detection of Dog-Derived Ancylostoma ceylanicum and A. caninum

To develop a Tm-shift method for detection of dog-derived Ancylostoma ceylanicum and A. caninum, three sets of primers were designed based on three SNPs (ITS71, ITS197, and ITS296) of their internal transcribed spacer 1 (ITS1) sequences. The detection effect of the Tm-shift was assessed through the...

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Main Authors: Yeqi Fu, Mingwei Wang, Xinxin Yan, Auwalu Yusuf Abdullahi, Jianxiong Hang, Pan Zhang, Yue Huang, Yunqiu Liu, Yongxiang Sun, Rongkun Ran, Guoqing Li
Format: Article
Language:English
Published: Hindawi Limited 2018-01-01
Series:BioMed Research International
Online Access:http://dx.doi.org/10.1155/2018/7617094
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spelling doaj-0e6b030f69744fbf9287329576c61b922020-11-25T00:12:48ZengHindawi LimitedBioMed Research International2314-61332314-61412018-01-01201810.1155/2018/76170947617094Tm-Shift Detection of Dog-Derived Ancylostoma ceylanicum and A. caninumYeqi Fu0Mingwei Wang1Xinxin Yan2Auwalu Yusuf Abdullahi3Jianxiong Hang4Pan Zhang5Yue Huang6Yunqiu Liu7Yongxiang Sun8Rongkun Ran9Guoqing Li10Guangdong Provincial Zoonosis Prevention and Control Key Laboratory, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510542, ChinaGuangdong Provincial Zoonosis Prevention and Control Key Laboratory, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510542, ChinaGuangdong Provincial Zoonosis Prevention and Control Key Laboratory, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510542, ChinaGuangdong Provincial Zoonosis Prevention and Control Key Laboratory, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510542, ChinaGuangdong Provincial Zoonosis Prevention and Control Key Laboratory, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510542, ChinaGuangdong Provincial Zoonosis Prevention and Control Key Laboratory, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510542, ChinaGuangdong Provincial Zoonosis Prevention and Control Key Laboratory, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510542, ChinaGuangdong Provincial Zoonosis Prevention and Control Key Laboratory, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510542, ChinaGuangdong Provincial Zoonosis Prevention and Control Key Laboratory, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510542, ChinaGuangdong Provincial Zoonosis Prevention and Control Key Laboratory, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510542, ChinaGuangdong Provincial Zoonosis Prevention and Control Key Laboratory, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510542, ChinaTo develop a Tm-shift method for detection of dog-derived Ancylostoma ceylanicum and A. caninum, three sets of primers were designed based on three SNPs (ITS71, ITS197, and ITS296) of their internal transcribed spacer 1 (ITS1) sequences. The detection effect of the Tm-shift was assessed through the stability, sensitivity, accuracy test, and clinical detection. The results showed that these three sets of primers could distinguish accurately between A. ceylanicum and A. caninum. The coefficient of variation in their Tm values on the three SNPs was 0.09% and 0.15% (ITS71), 0.18% and 0.14% (ITS197), and 0.13% and 0.07% (ITS296), respectively. The lowest detectable concentration of standard plasmids for A. ceylanicum and A. caninum was 5.33 × 10−6 ng/μL and 5.03 × 10−6 ng/μL. The Tm-shift results of ten DNA samples from the dog-derived hookworms were consistent with their known species. In the clinical detection of 50 fecal samples from stray dogs, the positive rate of hookworm detected by Tm-shift (42%) was significantly higher than that by microscopic examination (34%), and the former can identify the Ancylostoma species. It is concluded that the Tm-shift method is rapid, specific, sensitive, and suitable for the clinical detection and zoonotic risk assessment of the dog-derived hookworm.http://dx.doi.org/10.1155/2018/7617094
collection DOAJ
language English
format Article
sources DOAJ
author Yeqi Fu
Mingwei Wang
Xinxin Yan
Auwalu Yusuf Abdullahi
Jianxiong Hang
Pan Zhang
Yue Huang
Yunqiu Liu
Yongxiang Sun
Rongkun Ran
Guoqing Li
spellingShingle Yeqi Fu
Mingwei Wang
Xinxin Yan
Auwalu Yusuf Abdullahi
Jianxiong Hang
Pan Zhang
Yue Huang
Yunqiu Liu
Yongxiang Sun
Rongkun Ran
Guoqing Li
Tm-Shift Detection of Dog-Derived Ancylostoma ceylanicum and A. caninum
BioMed Research International
author_facet Yeqi Fu
Mingwei Wang
Xinxin Yan
Auwalu Yusuf Abdullahi
Jianxiong Hang
Pan Zhang
Yue Huang
Yunqiu Liu
Yongxiang Sun
Rongkun Ran
Guoqing Li
author_sort Yeqi Fu
title Tm-Shift Detection of Dog-Derived Ancylostoma ceylanicum and A. caninum
title_short Tm-Shift Detection of Dog-Derived Ancylostoma ceylanicum and A. caninum
title_full Tm-Shift Detection of Dog-Derived Ancylostoma ceylanicum and A. caninum
title_fullStr Tm-Shift Detection of Dog-Derived Ancylostoma ceylanicum and A. caninum
title_full_unstemmed Tm-Shift Detection of Dog-Derived Ancylostoma ceylanicum and A. caninum
title_sort tm-shift detection of dog-derived ancylostoma ceylanicum and a. caninum
publisher Hindawi Limited
series BioMed Research International
issn 2314-6133
2314-6141
publishDate 2018-01-01
description To develop a Tm-shift method for detection of dog-derived Ancylostoma ceylanicum and A. caninum, three sets of primers were designed based on three SNPs (ITS71, ITS197, and ITS296) of their internal transcribed spacer 1 (ITS1) sequences. The detection effect of the Tm-shift was assessed through the stability, sensitivity, accuracy test, and clinical detection. The results showed that these three sets of primers could distinguish accurately between A. ceylanicum and A. caninum. The coefficient of variation in their Tm values on the three SNPs was 0.09% and 0.15% (ITS71), 0.18% and 0.14% (ITS197), and 0.13% and 0.07% (ITS296), respectively. The lowest detectable concentration of standard plasmids for A. ceylanicum and A. caninum was 5.33 × 10−6 ng/μL and 5.03 × 10−6 ng/μL. The Tm-shift results of ten DNA samples from the dog-derived hookworms were consistent with their known species. In the clinical detection of 50 fecal samples from stray dogs, the positive rate of hookworm detected by Tm-shift (42%) was significantly higher than that by microscopic examination (34%), and the former can identify the Ancylostoma species. It is concluded that the Tm-shift method is rapid, specific, sensitive, and suitable for the clinical detection and zoonotic risk assessment of the dog-derived hookworm.
url http://dx.doi.org/10.1155/2018/7617094
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