Validation of a Mathematical Model for Green Algae (Raphidocelis Subcapitata) Growth and Implications for a Coupled Dynamical System with Daphnia Magna

Toxicity testing in populations probes for responses in demographic variables to anthropogenic or natural chemical changes in the environment. Importantly, these tests are primarily performed on species in isolation of adjacent tropic levels in their ecosystem. The development and validation of coup...

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Main Authors: Michael Stemkovski, Robert Baraldi, Kevin B. Flores, H.T. Banks
Format: Article
Language:English
Published: MDPI AG 2016-05-01
Series:Applied Sciences
Subjects:
Online Access:http://www.mdpi.com/2076-3417/6/5/155
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spelling doaj-0e0c14c2867d4fa1beee146e861b93e22020-11-24T21:07:39ZengMDPI AGApplied Sciences2076-34172016-05-016515510.3390/app6050155app6050155Validation of a Mathematical Model for Green Algae (Raphidocelis Subcapitata) Growth and Implications for a Coupled Dynamical System with Daphnia MagnaMichael Stemkovski0Robert Baraldi1Kevin B. Flores2H.T. Banks3Center for Research in Scientific Computation, North Carolina State University, Raleigh, NC 27695-8212, USACenter for Research in Scientific Computation, North Carolina State University, Raleigh, NC 27695-8212, USACenter for Research in Scientific Computation, North Carolina State University, Raleigh, NC 27695-8212, USACenter for Research in Scientific Computation, North Carolina State University, Raleigh, NC 27695-8212, USAToxicity testing in populations probes for responses in demographic variables to anthropogenic or natural chemical changes in the environment. Importantly, these tests are primarily performed on species in isolation of adjacent tropic levels in their ecosystem. The development and validation of coupled species models may aid in predicting adverse outcomes at the ecosystems level. Here, we aim to validate a model for the population dynamics of the green algae Raphidocelis subcapitata, a planktonic species that is often used as a primary food source in toxicity experiments for the fresh water crustacean Daphnia magna. We collected longitudinal data from three replicate population experiments of R. subcapitata. We used this data with statistical model comparison tests and uncertainty quantification techniques to compare the performance of four models: the Logistic model, the Bernoulli model, the Gompertz model, and a discretization of the Logistic model. Overall, our results suggest that the logistic model is the most accurate continuous model for R. subcapitata population growth. We then implement the numerical discretization showing how the continuous logistic model for algae can be coupled to a previously validated discrete-time population model for D. magna.http://www.mdpi.com/2076-3417/6/5/155algae growth modelsuncertainty quantificationasymptotic theorybootstrappingmodel comparison testsRaphidocelis subcapitataDaphnia magna
collection DOAJ
language English
format Article
sources DOAJ
author Michael Stemkovski
Robert Baraldi
Kevin B. Flores
H.T. Banks
spellingShingle Michael Stemkovski
Robert Baraldi
Kevin B. Flores
H.T. Banks
Validation of a Mathematical Model for Green Algae (Raphidocelis Subcapitata) Growth and Implications for a Coupled Dynamical System with Daphnia Magna
Applied Sciences
algae growth models
uncertainty quantification
asymptotic theory
bootstrapping
model comparison tests
Raphidocelis subcapitata
Daphnia magna
author_facet Michael Stemkovski
Robert Baraldi
Kevin B. Flores
H.T. Banks
author_sort Michael Stemkovski
title Validation of a Mathematical Model for Green Algae (Raphidocelis Subcapitata) Growth and Implications for a Coupled Dynamical System with Daphnia Magna
title_short Validation of a Mathematical Model for Green Algae (Raphidocelis Subcapitata) Growth and Implications for a Coupled Dynamical System with Daphnia Magna
title_full Validation of a Mathematical Model for Green Algae (Raphidocelis Subcapitata) Growth and Implications for a Coupled Dynamical System with Daphnia Magna
title_fullStr Validation of a Mathematical Model for Green Algae (Raphidocelis Subcapitata) Growth and Implications for a Coupled Dynamical System with Daphnia Magna
title_full_unstemmed Validation of a Mathematical Model for Green Algae (Raphidocelis Subcapitata) Growth and Implications for a Coupled Dynamical System with Daphnia Magna
title_sort validation of a mathematical model for green algae (raphidocelis subcapitata) growth and implications for a coupled dynamical system with daphnia magna
publisher MDPI AG
series Applied Sciences
issn 2076-3417
publishDate 2016-05-01
description Toxicity testing in populations probes for responses in demographic variables to anthropogenic or natural chemical changes in the environment. Importantly, these tests are primarily performed on species in isolation of adjacent tropic levels in their ecosystem. The development and validation of coupled species models may aid in predicting adverse outcomes at the ecosystems level. Here, we aim to validate a model for the population dynamics of the green algae Raphidocelis subcapitata, a planktonic species that is often used as a primary food source in toxicity experiments for the fresh water crustacean Daphnia magna. We collected longitudinal data from three replicate population experiments of R. subcapitata. We used this data with statistical model comparison tests and uncertainty quantification techniques to compare the performance of four models: the Logistic model, the Bernoulli model, the Gompertz model, and a discretization of the Logistic model. Overall, our results suggest that the logistic model is the most accurate continuous model for R. subcapitata population growth. We then implement the numerical discretization showing how the continuous logistic model for algae can be coupled to a previously validated discrete-time population model for D. magna.
topic algae growth models
uncertainty quantification
asymptotic theory
bootstrapping
model comparison tests
Raphidocelis subcapitata
Daphnia magna
url http://www.mdpi.com/2076-3417/6/5/155
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