MicroRNA Signatures of the Developing Primate Fovea

Rod and cone photoreceptors differ in their shape, photopigment expression, synaptic connection patterns, light sensitivity, and distribution across the retina. Although rods greatly outnumber cones, human vision is mostly dependent on cone photoreceptors since cones are essential for our sharp visu...

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Main Authors: Elizabeth S. Fishman, Mikaela Louie, Adam M. Miltner, Simranjeet K. Cheema, Joanna Wong, Nicholas M. Schlaeger, Ala Moshiri, Sergi Simó, Alice F. Tarantal, Anna La Torre
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-04-01
Series:Frontiers in Cell and Developmental Biology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fcell.2021.654385/full
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spelling doaj-0dfb8e71e7b942169a5bab201ced6f872021-04-08T04:51:02ZengFrontiers Media S.A.Frontiers in Cell and Developmental Biology2296-634X2021-04-01910.3389/fcell.2021.654385654385MicroRNA Signatures of the Developing Primate FoveaElizabeth S. Fishman0Mikaela Louie1Adam M. Miltner2Simranjeet K. Cheema3Joanna Wong4Nicholas M. Schlaeger5Ala Moshiri6Sergi Simó7Alice F. Tarantal8Alice F. Tarantal9Alice F. Tarantal10Anna La Torre11Department of Cell Biology and Human Anatomy, University of California, Davis, Davis, CA, United StatesDepartment of Cell Biology and Human Anatomy, University of California, Davis, Davis, CA, United StatesDepartment of Cell Biology and Human Anatomy, University of California, Davis, Davis, CA, United StatesDepartment of Cell Biology and Human Anatomy, University of California, Davis, Davis, CA, United StatesDepartment of Cell Biology and Human Anatomy, University of California, Davis, Davis, CA, United StatesDepartment of Cell Biology and Human Anatomy, University of California, Davis, Davis, CA, United StatesDepartment of Ophthalmology, University of California, Davis, Davis, CA, United StatesDepartment of Cell Biology and Human Anatomy, University of California, Davis, Davis, CA, United StatesDepartment of Cell Biology and Human Anatomy, University of California, Davis, Davis, CA, United StatesDepartment of Pediatrics, University of California, Davis, Davis, CA, United StatesCalifornia National Primate Research Center, University of California, Davis, Davis, CA, United StatesDepartment of Cell Biology and Human Anatomy, University of California, Davis, Davis, CA, United StatesRod and cone photoreceptors differ in their shape, photopigment expression, synaptic connection patterns, light sensitivity, and distribution across the retina. Although rods greatly outnumber cones, human vision is mostly dependent on cone photoreceptors since cones are essential for our sharp visual acuity and color discrimination. In humans and other primates, the fovea centralis (fovea), a specialized region of the central retina, contains the highest density of cones. Despite the vast importance of the fovea for human vision, the molecular mechanisms guiding the development of this region are largely unknown. MicroRNAs (miRNAs) are small post-transcriptional regulators known to orchestrate developmental transitions and cell fate specification in the retina. Here, we have characterized the transcriptional landscape of the developing rhesus monkey retina. Our data indicates that non-human primate fovea development is significantly accelerated compared to the equivalent retinal region at the other side of the optic nerve head, as described previously. Notably, we also identify several miRNAs differentially expressed in the presumptive fovea, including miR-15b-5p, miR-342-5p, miR-30b-5p, miR-103-3p, miR-93-5p as well as the miRNA cluster miR-183/-96/-182. Interestingly, miR-342-5p is enriched in the nasal primate retina and in the peripheral developing mouse retina, while miR-15b is enriched in the temporal primate retina and increases over time in the mouse retina in a central-to-periphery gradient. Together our data constitutes the first characterization of the developing rhesus monkey retinal miRNome and provides novel datasets to attain a more comprehensive understanding of foveal development.https://www.frontiersin.org/articles/10.3389/fcell.2021.654385/fullmicroRNAsretinal developmentfoveamiR-342-5pmiR-15brhesus monkey
collection DOAJ
language English
format Article
sources DOAJ
author Elizabeth S. Fishman
Mikaela Louie
Adam M. Miltner
Simranjeet K. Cheema
Joanna Wong
Nicholas M. Schlaeger
Ala Moshiri
Sergi Simó
Alice F. Tarantal
Alice F. Tarantal
Alice F. Tarantal
Anna La Torre
spellingShingle Elizabeth S. Fishman
Mikaela Louie
Adam M. Miltner
Simranjeet K. Cheema
Joanna Wong
Nicholas M. Schlaeger
Ala Moshiri
Sergi Simó
Alice F. Tarantal
Alice F. Tarantal
Alice F. Tarantal
Anna La Torre
MicroRNA Signatures of the Developing Primate Fovea
Frontiers in Cell and Developmental Biology
microRNAs
retinal development
fovea
miR-342-5p
miR-15b
rhesus monkey
author_facet Elizabeth S. Fishman
Mikaela Louie
Adam M. Miltner
Simranjeet K. Cheema
Joanna Wong
Nicholas M. Schlaeger
Ala Moshiri
Sergi Simó
Alice F. Tarantal
Alice F. Tarantal
Alice F. Tarantal
Anna La Torre
author_sort Elizabeth S. Fishman
title MicroRNA Signatures of the Developing Primate Fovea
title_short MicroRNA Signatures of the Developing Primate Fovea
title_full MicroRNA Signatures of the Developing Primate Fovea
title_fullStr MicroRNA Signatures of the Developing Primate Fovea
title_full_unstemmed MicroRNA Signatures of the Developing Primate Fovea
title_sort microrna signatures of the developing primate fovea
publisher Frontiers Media S.A.
series Frontiers in Cell and Developmental Biology
issn 2296-634X
publishDate 2021-04-01
description Rod and cone photoreceptors differ in their shape, photopigment expression, synaptic connection patterns, light sensitivity, and distribution across the retina. Although rods greatly outnumber cones, human vision is mostly dependent on cone photoreceptors since cones are essential for our sharp visual acuity and color discrimination. In humans and other primates, the fovea centralis (fovea), a specialized region of the central retina, contains the highest density of cones. Despite the vast importance of the fovea for human vision, the molecular mechanisms guiding the development of this region are largely unknown. MicroRNAs (miRNAs) are small post-transcriptional regulators known to orchestrate developmental transitions and cell fate specification in the retina. Here, we have characterized the transcriptional landscape of the developing rhesus monkey retina. Our data indicates that non-human primate fovea development is significantly accelerated compared to the equivalent retinal region at the other side of the optic nerve head, as described previously. Notably, we also identify several miRNAs differentially expressed in the presumptive fovea, including miR-15b-5p, miR-342-5p, miR-30b-5p, miR-103-3p, miR-93-5p as well as the miRNA cluster miR-183/-96/-182. Interestingly, miR-342-5p is enriched in the nasal primate retina and in the peripheral developing mouse retina, while miR-15b is enriched in the temporal primate retina and increases over time in the mouse retina in a central-to-periphery gradient. Together our data constitutes the first characterization of the developing rhesus monkey retinal miRNome and provides novel datasets to attain a more comprehensive understanding of foveal development.
topic microRNAs
retinal development
fovea
miR-342-5p
miR-15b
rhesus monkey
url https://www.frontiersin.org/articles/10.3389/fcell.2021.654385/full
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