Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from China

Pseudomonas syringae pv. actinidiae is a bacterial pathogen of kiwifruit. Based on the results of the pathogenicity assay, we sequenced the strain Pseudomonas syringae (Psa3) P155 which possesses a series of virulence and resistance genes, CRISPR candidate elements, prophage related sequences, methy...

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Main Authors: Xin Pan, Siyue Zhao, Yongzhi Wang, Mingzhang Li, Liqin He, Qiguo Zhuang
Format: Article
Language:English
Published: Universidade Federal de Uberlândia 2020-09-01
Series:Bioscience Journal
Subjects:
Online Access:http://www.seer.ufu.br/index.php/biosciencejournal/article/view/47896
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spelling doaj-0d6fd0a07e274962a1697f04bb56e31a2021-07-02T15:57:39ZengUniversidade Federal de UberlândiaBioscience Journal1981-31632020-09-0136610.14393/BJ-v36n6a2020-4789647896Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from ChinaXin Pan0Siyue Zhao1Yongzhi Wang2Mingzhang Li3Liqin He4Qiguo Zhuang5Chengdu University of TechnologySichuan Agricultural UniversitySichuan Provincial Academy of Natural Resource SciencesSichuan Provincial Academy of Natural Resource SciencesSichuan Provincial Academy of Natural Resource SciencesSichuan Provincial Academy of Natural Resource SciencesPseudomonas syringae pv. actinidiae is a bacterial pathogen of kiwifruit. Based on the results of the pathogenicity assay, we sequenced the strain Pseudomonas syringae (Psa3) P155 which possesses a series of virulence and resistance genes, CRISPR candidate elements, prophage related sequences, methylation modifications, genomic islands as well as one plasmid. Most importantly, the copper resistance genes copA, copB, copC, copD, and copZ as well as aminoglycoside resistance gene ksgA were identified in strain P155, which would pose a threat to kiwifruit production. The complete sequence we reported here will provide valuable information for a better understanding of the genetic structure and pathogenic characteristics of the genome of P155.http://www.seer.ufu.br/index.php/biosciencejournal/article/view/47896actinidia sp.complete sequence.bacterial canker.pathogenicity.pac-bio platform.
collection DOAJ
language English
format Article
sources DOAJ
author Xin Pan
Siyue Zhao
Yongzhi Wang
Mingzhang Li
Liqin He
Qiguo Zhuang
spellingShingle Xin Pan
Siyue Zhao
Yongzhi Wang
Mingzhang Li
Liqin He
Qiguo Zhuang
Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from China
Bioscience Journal
actinidia sp.
complete sequence.
bacterial canker.
pathogenicity.
pac-bio platform.
author_facet Xin Pan
Siyue Zhao
Yongzhi Wang
Mingzhang Li
Liqin He
Qiguo Zhuang
author_sort Xin Pan
title Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from China
title_short Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from China
title_full Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from China
title_fullStr Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from China
title_full_unstemmed Complete genome sequencing of Pseudomonas syringae pv. actinidiae Biovar 3, P155, kiwifruit pathogen originating from China
title_sort complete genome sequencing of pseudomonas syringae pv. actinidiae biovar 3, p155, kiwifruit pathogen originating from china
publisher Universidade Federal de Uberlândia
series Bioscience Journal
issn 1981-3163
publishDate 2020-09-01
description Pseudomonas syringae pv. actinidiae is a bacterial pathogen of kiwifruit. Based on the results of the pathogenicity assay, we sequenced the strain Pseudomonas syringae (Psa3) P155 which possesses a series of virulence and resistance genes, CRISPR candidate elements, prophage related sequences, methylation modifications, genomic islands as well as one plasmid. Most importantly, the copper resistance genes copA, copB, copC, copD, and copZ as well as aminoglycoside resistance gene ksgA were identified in strain P155, which would pose a threat to kiwifruit production. The complete sequence we reported here will provide valuable information for a better understanding of the genetic structure and pathogenic characteristics of the genome of P155.
topic actinidia sp.
complete sequence.
bacterial canker.
pathogenicity.
pac-bio platform.
url http://www.seer.ufu.br/index.php/biosciencejournal/article/view/47896
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