A 3D Scanning System for Inverse Analysis of Moist Biological Samples: Design and Validation Using Tendon Fascicle Bundles

In this article, we present the design and validation of a non-contact scanning system for the development of a three-dimensional (3D) model of moist biological samples. Due to the irregular shapes and low stiffness of soft tissue samples, the use of a non-contact, reliable geometry scanning system...

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Main Authors: Sylwia Dabrowska, Martyna Ekiert, Kaja Wojcik, Marek Kalemba, Andrzej Mlyniec
Format: Article
Language:English
Published: MDPI AG 2020-07-01
Series:Sensors
Subjects:
Online Access:https://www.mdpi.com/1424-8220/20/14/3847
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spelling doaj-0d49728caf954aa29240e73477c008b62020-11-25T03:25:49ZengMDPI AGSensors1424-82202020-07-01203847384710.3390/s20143847A 3D Scanning System for Inverse Analysis of Moist Biological Samples: Design and Validation Using Tendon Fascicle BundlesSylwia Dabrowska0Martyna Ekiert1Kaja Wojcik2Marek Kalemba3Andrzej Mlyniec4Faculty of Mechanical Engineering and Robotics, AGH University of Science and Technology, Al. Mickiewicza 30, 30-059 Cracow, PolandFaculty of Mechanical Engineering and Robotics, AGH University of Science and Technology, Al. Mickiewicza 30, 30-059 Cracow, PolandFaculty of Mechanical Engineering and Robotics, AGH University of Science and Technology, Al. Mickiewicza 30, 30-059 Cracow, PolandFaculty of Mechanical Engineering and Robotics, AGH University of Science and Technology, Al. Mickiewicza 30, 30-059 Cracow, PolandFaculty of Mechanical Engineering and Robotics, AGH University of Science and Technology, Al. Mickiewicza 30, 30-059 Cracow, PolandIn this article, we present the design and validation of a non-contact scanning system for the development of a three-dimensional (3D) model of moist biological samples. Due to the irregular shapes and low stiffness of soft tissue samples, the use of a non-contact, reliable geometry scanning system with good accuracy and repeatability is required. We propose a reliable 3D scanning system consisting of a blue light profile sensor, stationary and rotating frames with stepper motors, gears and a five-phase stepping motor unit, single-axis robot, control system, and replaceable sample grips, which once mounted onto the sample, are used for both scanning and mechanical tests. The proposed system was validated by comparison of the cross-sectional areas calculated based on 3D models, digital caliper, and vision-based methods. Validation was done on regularly-shaped samples, a wooden twig, as well as tendon fascicle bundles. The 3D profiles were used for the development of the 3D computational model of the sample, including surface concavities. Our system allowed for 3D model development of samples with a relative error of less than 1.2% and high repeatability in approximately three minutes. This was crucial for the extraction of the mechanical properties and subsequent inverse analysis, enabling the calibration of complex material models.https://www.mdpi.com/1424-8220/20/14/3847non-contact measurementthree-dimensional imagingtendontendon fascicle bundles3D modelsoft tissues
collection DOAJ
language English
format Article
sources DOAJ
author Sylwia Dabrowska
Martyna Ekiert
Kaja Wojcik
Marek Kalemba
Andrzej Mlyniec
spellingShingle Sylwia Dabrowska
Martyna Ekiert
Kaja Wojcik
Marek Kalemba
Andrzej Mlyniec
A 3D Scanning System for Inverse Analysis of Moist Biological Samples: Design and Validation Using Tendon Fascicle Bundles
Sensors
non-contact measurement
three-dimensional imaging
tendon
tendon fascicle bundles
3D model
soft tissues
author_facet Sylwia Dabrowska
Martyna Ekiert
Kaja Wojcik
Marek Kalemba
Andrzej Mlyniec
author_sort Sylwia Dabrowska
title A 3D Scanning System for Inverse Analysis of Moist Biological Samples: Design and Validation Using Tendon Fascicle Bundles
title_short A 3D Scanning System for Inverse Analysis of Moist Biological Samples: Design and Validation Using Tendon Fascicle Bundles
title_full A 3D Scanning System for Inverse Analysis of Moist Biological Samples: Design and Validation Using Tendon Fascicle Bundles
title_fullStr A 3D Scanning System for Inverse Analysis of Moist Biological Samples: Design and Validation Using Tendon Fascicle Bundles
title_full_unstemmed A 3D Scanning System for Inverse Analysis of Moist Biological Samples: Design and Validation Using Tendon Fascicle Bundles
title_sort 3d scanning system for inverse analysis of moist biological samples: design and validation using tendon fascicle bundles
publisher MDPI AG
series Sensors
issn 1424-8220
publishDate 2020-07-01
description In this article, we present the design and validation of a non-contact scanning system for the development of a three-dimensional (3D) model of moist biological samples. Due to the irregular shapes and low stiffness of soft tissue samples, the use of a non-contact, reliable geometry scanning system with good accuracy and repeatability is required. We propose a reliable 3D scanning system consisting of a blue light profile sensor, stationary and rotating frames with stepper motors, gears and a five-phase stepping motor unit, single-axis robot, control system, and replaceable sample grips, which once mounted onto the sample, are used for both scanning and mechanical tests. The proposed system was validated by comparison of the cross-sectional areas calculated based on 3D models, digital caliper, and vision-based methods. Validation was done on regularly-shaped samples, a wooden twig, as well as tendon fascicle bundles. The 3D profiles were used for the development of the 3D computational model of the sample, including surface concavities. Our system allowed for 3D model development of samples with a relative error of less than 1.2% and high repeatability in approximately three minutes. This was crucial for the extraction of the mechanical properties and subsequent inverse analysis, enabling the calibration of complex material models.
topic non-contact measurement
three-dimensional imaging
tendon
tendon fascicle bundles
3D model
soft tissues
url https://www.mdpi.com/1424-8220/20/14/3847
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