CHESS: a new human gene catalog curated from thousands of large-scale RNA sequencing experiments reveals extensive transcriptional noise

CHESS: a new human gene catalog curated from thousands of large-scale RNA sequencing experiments reveals extensive transcriptional noise

Abstract We assembled the sequences from deep RNA sequencing experiments by the Genotype-Tissue Expression (GTEx) project, to create a new catalog of human genes and transcripts, called CHESS. The new database contains 42,611 genes, of which 20,352 are potentially protein-coding and 22,259 are nonco...

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Bibliographic Details
Main Authors: Mihaela Pertea, Alaina Shumate, Geo Pertea, Ales Varabyou, Florian P. Breitwieser, Yu-Chi Chang, Anil K. Madugundu, Akhilesh Pandey, Steven L. Salzberg
Format: Article
Language:English
Published: BMC 2018-11-01
Series:Genome Biology
Subjects:
Human gene count
GTEx
RNA sequencing
Transcriptome
Transcriptome assembly
Online Access:http://link.springer.com/article/10.1186/s13059-018-1590-2

Internet

http://link.springer.com/article/10.1186/s13059-018-1590-2

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