Modelling and Analysis of miRNA Regulation

MiRNA regulation is involved in many important biological processes such as cell proliferation, apoptosis and metabolism. Computational predictions of miRNA targets suggest that up 30 % of human proteins coding genes may be regulated by miRNAs. This makes miRNAs one of the most abundant classes of r...

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Main Author: Svetoslav Ganchev Nikolov
Format: Article
Language:English
Published: Biomath Forum 2014-09-01
Series:Biomath
Subjects:
Online Access:http://www.biomathforum.org/biomath/index.php/biomath/article/view/333
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spelling doaj-0cab5dab1eb74738927d9a8b725ce1a82020-11-25T00:55:14ZengBiomath ForumBiomath1314-684X1314-72182014-09-013210.11145/j.biomath.2014.07.231248Modelling and Analysis of miRNA RegulationSvetoslav Ganchev Nikolov0Institute of Mechanics-BASMiRNA regulation is involved in many important biological processes such as cell proliferation, apoptosis and metabolism. Computational predictions of miRNA targets suggest that up 30 % of human proteins coding genes may be regulated by miRNAs. This makes miRNAs one of the most abundant classes of regulatory genes in humans. In the present paper we develop a time delay model of a feedback system regulated via miRNA. The model resulted in three DDEs with three discrete time delays. Since this system is a classical case study, covering several essential features of miRNA and genetic regulatory mechanisms, general conclusions about design principles and role of time delays in the stability of gene circuits can be suggested. The basic view that time delays are a key factor in the dynamic behaviour of the system was confirmed by the analytical calculations and numerical simulations.http://www.biomathforum.org/biomath/index.php/biomath/article/view/333miRNA regulationtime delayAndronov-Hopf bifurcationnumerical analysis
collection DOAJ
language English
format Article
sources DOAJ
author Svetoslav Ganchev Nikolov
spellingShingle Svetoslav Ganchev Nikolov
Modelling and Analysis of miRNA Regulation
Biomath
miRNA regulation
time delay
Andronov-Hopf bifurcation
numerical analysis
author_facet Svetoslav Ganchev Nikolov
author_sort Svetoslav Ganchev Nikolov
title Modelling and Analysis of miRNA Regulation
title_short Modelling and Analysis of miRNA Regulation
title_full Modelling and Analysis of miRNA Regulation
title_fullStr Modelling and Analysis of miRNA Regulation
title_full_unstemmed Modelling and Analysis of miRNA Regulation
title_sort modelling and analysis of mirna regulation
publisher Biomath Forum
series Biomath
issn 1314-684X
1314-7218
publishDate 2014-09-01
description MiRNA regulation is involved in many important biological processes such as cell proliferation, apoptosis and metabolism. Computational predictions of miRNA targets suggest that up 30 % of human proteins coding genes may be regulated by miRNAs. This makes miRNAs one of the most abundant classes of regulatory genes in humans. In the present paper we develop a time delay model of a feedback system regulated via miRNA. The model resulted in three DDEs with three discrete time delays. Since this system is a classical case study, covering several essential features of miRNA and genetic regulatory mechanisms, general conclusions about design principles and role of time delays in the stability of gene circuits can be suggested. The basic view that time delays are a key factor in the dynamic behaviour of the system was confirmed by the analytical calculations and numerical simulations.
topic miRNA regulation
time delay
Andronov-Hopf bifurcation
numerical analysis
url http://www.biomathforum.org/biomath/index.php/biomath/article/view/333
work_keys_str_mv AT svetoslavganchevnikolov modellingandanalysisofmirnaregulation
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