Molecular network-based analysis of the mechanism of liver injury induced by volatile oils from Artemisiae argyi folium
Abstract Background Volatile oils from Artemisiae argyi folium (VOAAF) is reported with hepatotoxicity, but the underlying mechanism is still unclear. Methods In the present study this molecular mechanism was explored with the Ingenuity Pathway Analysis (IPA). The chemical components of the VOAAF we...
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doaj-0c6b42cfe46c437d8ec9cf1e9f1c402e2020-11-25T03:29:11ZengBMCBMC Complementary and Alternative Medicine1472-68822017-11-011711910.1186/s12906-017-1997-4Molecular network-based analysis of the mechanism of liver injury induced by volatile oils from Artemisiae argyi foliumHongjie Liu0Sha Zhan1Yan Zhang2Yan Ma3Liang Chen4Lingxiu Chen5Hanqiu Dong6Min Ma7Zhe Zhang8Department of Traditional Chinese Medicine, Jinan UniversityDepartment of Traditional Chinese Medicine, Jinan UniversityShandong University of Traditional Chinese MedicineShandong University of Traditional Chinese MedicineDepartment of Traditional Chinese Medicine, Jinan UniversityDepartment of Traditional Chinese Medicine, Jinan UniversityDepartment of Traditional Chinese Medicine, Jinan UniversityDepartment of Traditional Chinese Medicine, Jinan UniversityShandong University of Traditional Chinese MedicineAbstract Background Volatile oils from Artemisiae argyi folium (VOAAF) is reported with hepatotoxicity, but the underlying mechanism is still unclear. Methods In the present study this molecular mechanism was explored with the Ingenuity Pathway Analysis (IPA). The chemical components of the VOAAF were searched in the database, and their target proteins were all identified in the PubChem, while drug-induced liver injury (DILI) genes were searched in the PubMed gene databases. The molecular network of protein targets for VOAAF and DILI genes was built with the IPA. The canonical pathways between the 2 networks were compared to decipher the molecular mechanisms of the liver injury induced by VOAAF. Results There were 159 target proteins for VOAAF and 338 genes related to DILI identified, which were further analyzed in the IPA. The canonical pathway comparison showed that VOAAF and DILI both worked on aryl hydrocarbon receptor (AHR), lipopolysaccharide (LPS)/interleukin 1 (IL-1) mediated inhibition of retinoid X receptor (RXR) function, pregnane X receptor (PXR)/RXR activation, xenobiotic metabolism, peroxisome proliferator-activated receptor (PPAR), hepatic cholestasis, farnesoid X receptor (FXR)/RXR activation, and glucocorticoid receptor. Conclusion VOAAF-induced liver injury may be involved in many pathways in which the AHR signaling and LPS/IL-1 mediated inhibition of RXR function pathways could be the most vital.http://link.springer.com/article/10.1186/s12906-017-1997-4Volatile oils from Artemisiae argyi foliumChinese herbal drugsDrug-induced liver injuryBioinformatics |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Hongjie Liu Sha Zhan Yan Zhang Yan Ma Liang Chen Lingxiu Chen Hanqiu Dong Min Ma Zhe Zhang |
spellingShingle |
Hongjie Liu Sha Zhan Yan Zhang Yan Ma Liang Chen Lingxiu Chen Hanqiu Dong Min Ma Zhe Zhang Molecular network-based analysis of the mechanism of liver injury induced by volatile oils from Artemisiae argyi folium BMC Complementary and Alternative Medicine Volatile oils from Artemisiae argyi folium Chinese herbal drugs Drug-induced liver injury Bioinformatics |
author_facet |
Hongjie Liu Sha Zhan Yan Zhang Yan Ma Liang Chen Lingxiu Chen Hanqiu Dong Min Ma Zhe Zhang |
author_sort |
Hongjie Liu |
title |
Molecular network-based analysis of the mechanism of liver injury induced by volatile oils from Artemisiae argyi folium |
title_short |
Molecular network-based analysis of the mechanism of liver injury induced by volatile oils from Artemisiae argyi folium |
title_full |
Molecular network-based analysis of the mechanism of liver injury induced by volatile oils from Artemisiae argyi folium |
title_fullStr |
Molecular network-based analysis of the mechanism of liver injury induced by volatile oils from Artemisiae argyi folium |
title_full_unstemmed |
Molecular network-based analysis of the mechanism of liver injury induced by volatile oils from Artemisiae argyi folium |
title_sort |
molecular network-based analysis of the mechanism of liver injury induced by volatile oils from artemisiae argyi folium |
publisher |
BMC |
series |
BMC Complementary and Alternative Medicine |
issn |
1472-6882 |
publishDate |
2017-11-01 |
description |
Abstract Background Volatile oils from Artemisiae argyi folium (VOAAF) is reported with hepatotoxicity, but the underlying mechanism is still unclear. Methods In the present study this molecular mechanism was explored with the Ingenuity Pathway Analysis (IPA). The chemical components of the VOAAF were searched in the database, and their target proteins were all identified in the PubChem, while drug-induced liver injury (DILI) genes were searched in the PubMed gene databases. The molecular network of protein targets for VOAAF and DILI genes was built with the IPA. The canonical pathways between the 2 networks were compared to decipher the molecular mechanisms of the liver injury induced by VOAAF. Results There were 159 target proteins for VOAAF and 338 genes related to DILI identified, which were further analyzed in the IPA. The canonical pathway comparison showed that VOAAF and DILI both worked on aryl hydrocarbon receptor (AHR), lipopolysaccharide (LPS)/interleukin 1 (IL-1) mediated inhibition of retinoid X receptor (RXR) function, pregnane X receptor (PXR)/RXR activation, xenobiotic metabolism, peroxisome proliferator-activated receptor (PPAR), hepatic cholestasis, farnesoid X receptor (FXR)/RXR activation, and glucocorticoid receptor. Conclusion VOAAF-induced liver injury may be involved in many pathways in which the AHR signaling and LPS/IL-1 mediated inhibition of RXR function pathways could be the most vital. |
topic |
Volatile oils from Artemisiae argyi folium Chinese herbal drugs Drug-induced liver injury Bioinformatics |
url |
http://link.springer.com/article/10.1186/s12906-017-1997-4 |
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