LED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strain

Abstract Background Within the last decade, genetic engineering and synthetic biology have revolutionized society´s ability to mass-produce complex biological products within genetically-modified microorganisms containing elegantly designed genetic circuitry. However, many challenges still exist in...

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Main Authors: Hossein Alishah Aratboni, Nahid Rafiei, Larousse Khosravi Khorashad, Albert Isaac Lerma-Escalera, Francisco de Jesús Balderas-Cisneros, Zhaowei Liu, Abbas Alemzadeh, Sadasivan Shaji, José Ruben Morones-Ramírez
Format: Article
Language:English
Published: BMC 2021-06-01
Series:Journal of Nanobiotechnology
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Online Access:https://doi.org/10.1186/s12951-021-00937-x
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spelling doaj-0bef5ababac449eda2c676001448b4a72021-06-27T11:07:28ZengBMCJournal of Nanobiotechnology1477-31552021-06-0119111210.1186/s12951-021-00937-xLED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strainHossein Alishah Aratboni0Nahid Rafiei1Larousse Khosravi Khorashad2Albert Isaac Lerma-Escalera3Francisco de Jesús Balderas-Cisneros4Zhaowei Liu5Abbas Alemzadeh6Sadasivan Shaji7José Ruben Morones-Ramírez8Universidad Autónoma de Nuevo León, UANL. Facultad de Ciencias QuímicasUniversidad Autónoma de Nuevo León, UANL. Facultad de Ciencias QuímicasDepartment of Electrical and Computer Engineering, University of CaliforniaUniversidad Autónoma de Nuevo León, UANL. Facultad de Ciencias QuímicasUniversidad Autónoma de Nuevo León, UANL. Facultad de Ciencias QuímicasDepartment of Electrical and Computer Engineering, University of CaliforniaDepartment of Crop Production and Plant Breeding, School of Agriculture, Shiraz UniversityUniversidad Autónoma de Nuevo León, UANL. Facultad de ingeniería mecánica y eléctricaUniversidad Autónoma de Nuevo León, UANL. Facultad de Ciencias QuímicasAbstract Background Within the last decade, genetic engineering and synthetic biology have revolutionized society´s ability to mass-produce complex biological products within genetically-modified microorganisms containing elegantly designed genetic circuitry. However, many challenges still exist in developing bioproduction processes involving genetically modified microorganisms with complex or multiple gene circuits. These challenges include the development of external gene expression regulation methods with the following characteristics: spatial–temporal control and scalability, while inducing minimal permanent or irreversible system-wide conditions. Different stimuli have been used to control gene expression and mitigate these challenges, and they can be characterized by the effect they produce in the culture media conditions. Invasive stimuli that cause permanent, irreversible changes (pH and chemical inducers), non-invasive stimuli that cause partially reversible changes (temperature), and non-invasive stimuli that cause reversible changes in the media conditions (ultrasound, magnetic fields, and light). Methods Opto-control of gene expression is a non-invasive external trigger that complies with most of the desired characteristics of an external control system. However, the disadvantage relies on the design of the biological photoreceptors and the necessity to design them to respond to a different wavelength for every bioprocess needed to be controlled or regulated in the microorganism. Therefore, this work proposes using biocompatible metallic nanoparticles as external controllers of gene expression, based on their ability to convert light into heat and the capacity of nanotechnology to easily design a wide array of nanostructures capable of absorbing light at different wavelengths and inducing plasmonic photothermal heating. Results Here, we designed a nanobiosystem that can be opto-thermally triggered using LED light. The nanobiosystem is composed of biocompatible gold nanoparticles and a genetically modified E. coli with a plasmid that allows mCherry fluorescent protein production at 37 °C in response to an RNA thermometer. Conclusions The LED-triggered photothermal protein production system here designed offers a new, cheaper, scalable switchable method, non-destructive for living organisms, and contribute toward the evolution of bioprocess production systems.https://doi.org/10.1186/s12951-021-00937-xNanobiosystemGold nanoparticlesMathematical model opto-thermal conversionOpto-thermal nanoconvertersMetallic nanoparticlesBioprocess production
collection DOAJ
language English
format Article
sources DOAJ
author Hossein Alishah Aratboni
Nahid Rafiei
Larousse Khosravi Khorashad
Albert Isaac Lerma-Escalera
Francisco de Jesús Balderas-Cisneros
Zhaowei Liu
Abbas Alemzadeh
Sadasivan Shaji
José Ruben Morones-Ramírez
spellingShingle Hossein Alishah Aratboni
Nahid Rafiei
Larousse Khosravi Khorashad
Albert Isaac Lerma-Escalera
Francisco de Jesús Balderas-Cisneros
Zhaowei Liu
Abbas Alemzadeh
Sadasivan Shaji
José Ruben Morones-Ramírez
LED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strain
Journal of Nanobiotechnology
Nanobiosystem
Gold nanoparticles
Mathematical model opto-thermal conversion
Opto-thermal nanoconverters
Metallic nanoparticles
Bioprocess production
author_facet Hossein Alishah Aratboni
Nahid Rafiei
Larousse Khosravi Khorashad
Albert Isaac Lerma-Escalera
Francisco de Jesús Balderas-Cisneros
Zhaowei Liu
Abbas Alemzadeh
Sadasivan Shaji
José Ruben Morones-Ramírez
author_sort Hossein Alishah Aratboni
title LED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strain
title_short LED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strain
title_full LED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strain
title_fullStr LED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strain
title_full_unstemmed LED control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified E. coli strain
title_sort led control of gene expression in a nanobiosystem composed of metallic nanoparticles and a genetically modified e. coli strain
publisher BMC
series Journal of Nanobiotechnology
issn 1477-3155
publishDate 2021-06-01
description Abstract Background Within the last decade, genetic engineering and synthetic biology have revolutionized society´s ability to mass-produce complex biological products within genetically-modified microorganisms containing elegantly designed genetic circuitry. However, many challenges still exist in developing bioproduction processes involving genetically modified microorganisms with complex or multiple gene circuits. These challenges include the development of external gene expression regulation methods with the following characteristics: spatial–temporal control and scalability, while inducing minimal permanent or irreversible system-wide conditions. Different stimuli have been used to control gene expression and mitigate these challenges, and they can be characterized by the effect they produce in the culture media conditions. Invasive stimuli that cause permanent, irreversible changes (pH and chemical inducers), non-invasive stimuli that cause partially reversible changes (temperature), and non-invasive stimuli that cause reversible changes in the media conditions (ultrasound, magnetic fields, and light). Methods Opto-control of gene expression is a non-invasive external trigger that complies with most of the desired characteristics of an external control system. However, the disadvantage relies on the design of the biological photoreceptors and the necessity to design them to respond to a different wavelength for every bioprocess needed to be controlled or regulated in the microorganism. Therefore, this work proposes using biocompatible metallic nanoparticles as external controllers of gene expression, based on their ability to convert light into heat and the capacity of nanotechnology to easily design a wide array of nanostructures capable of absorbing light at different wavelengths and inducing plasmonic photothermal heating. Results Here, we designed a nanobiosystem that can be opto-thermally triggered using LED light. The nanobiosystem is composed of biocompatible gold nanoparticles and a genetically modified E. coli with a plasmid that allows mCherry fluorescent protein production at 37 °C in response to an RNA thermometer. Conclusions The LED-triggered photothermal protein production system here designed offers a new, cheaper, scalable switchable method, non-destructive for living organisms, and contribute toward the evolution of bioprocess production systems.
topic Nanobiosystem
Gold nanoparticles
Mathematical model opto-thermal conversion
Opto-thermal nanoconverters
Metallic nanoparticles
Bioprocess production
url https://doi.org/10.1186/s12951-021-00937-x
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