The importance of making testable predictions: A cautionary tale.
We found a startling correlation (Pearson ρ > 0.97) between a single event in daily sea surface temperatures each spring, and peak fish egg abundance measurements the following summer, in 7 years of approximately weekly fish egg abundance data collected at Scripps Pier in La Jolla California. Eve...
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doaj-0b4c4b4e0c4645a990379f7c35b659162021-03-04T12:45:59ZengPublic Library of Science (PLoS)PLoS ONE1932-62032020-01-011512e023654110.1371/journal.pone.0236541The importance of making testable predictions: A cautionary tale.Emma S ChoiErik SaberskiTom LorimerCameron SmithUnduwap Kandage-DonRonald S BurtonGeorge SugiharaWe found a startling correlation (Pearson ρ > 0.97) between a single event in daily sea surface temperatures each spring, and peak fish egg abundance measurements the following summer, in 7 years of approximately weekly fish egg abundance data collected at Scripps Pier in La Jolla California. Even more surprising was that this event-based result persisted despite the large and variable number of fish species involved (up to 46), and the large and variable time interval between trigger and response (up to ~3 months). To mitigate potential over-fitting, we made an out-of-sample prediction beyond the publication process for the peak summer egg abundance observed at Scripps Pier in 2020 (available on bioRxiv). During peer-review, the prediction failed, and while it would be tempting to explain this away as a result of the record-breaking toxic algal bloom that occurred during the spring (9x higher concentration of dinoflagellates than ever previously recorded), a re-examination of our methodology revealed a potential source of over-fitting that had not been evaluated for robustness. This cautionary tale highlights the importance of testable true out-of-sample predictions of future values that cannot (even accidentally) be used in model fitting, and that can therefore catch model assumptions that may otherwise escape notice. We believe that this example can benefit the current push towards ecology as a predictive science and support the notion that predictions should live and die in the public domain, along with the models that made them.https://doi.org/10.1371/journal.pone.0236541 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Emma S Choi Erik Saberski Tom Lorimer Cameron Smith Unduwap Kandage-Don Ronald S Burton George Sugihara |
spellingShingle |
Emma S Choi Erik Saberski Tom Lorimer Cameron Smith Unduwap Kandage-Don Ronald S Burton George Sugihara The importance of making testable predictions: A cautionary tale. PLoS ONE |
author_facet |
Emma S Choi Erik Saberski Tom Lorimer Cameron Smith Unduwap Kandage-Don Ronald S Burton George Sugihara |
author_sort |
Emma S Choi |
title |
The importance of making testable predictions: A cautionary tale. |
title_short |
The importance of making testable predictions: A cautionary tale. |
title_full |
The importance of making testable predictions: A cautionary tale. |
title_fullStr |
The importance of making testable predictions: A cautionary tale. |
title_full_unstemmed |
The importance of making testable predictions: A cautionary tale. |
title_sort |
importance of making testable predictions: a cautionary tale. |
publisher |
Public Library of Science (PLoS) |
series |
PLoS ONE |
issn |
1932-6203 |
publishDate |
2020-01-01 |
description |
We found a startling correlation (Pearson ρ > 0.97) between a single event in daily sea surface temperatures each spring, and peak fish egg abundance measurements the following summer, in 7 years of approximately weekly fish egg abundance data collected at Scripps Pier in La Jolla California. Even more surprising was that this event-based result persisted despite the large and variable number of fish species involved (up to 46), and the large and variable time interval between trigger and response (up to ~3 months). To mitigate potential over-fitting, we made an out-of-sample prediction beyond the publication process for the peak summer egg abundance observed at Scripps Pier in 2020 (available on bioRxiv). During peer-review, the prediction failed, and while it would be tempting to explain this away as a result of the record-breaking toxic algal bloom that occurred during the spring (9x higher concentration of dinoflagellates than ever previously recorded), a re-examination of our methodology revealed a potential source of over-fitting that had not been evaluated for robustness. This cautionary tale highlights the importance of testable true out-of-sample predictions of future values that cannot (even accidentally) be used in model fitting, and that can therefore catch model assumptions that may otherwise escape notice. We believe that this example can benefit the current push towards ecology as a predictive science and support the notion that predictions should live and die in the public domain, along with the models that made them. |
url |
https://doi.org/10.1371/journal.pone.0236541 |
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