A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil

ABSTRACT The success of soil prediction by VIS-NIR-SWIR spectroscopy has led to considerable investment in large soil spectral libraries. The aims of this study were 1) to develop a soil VIS-NIR-SWIR spectroscopy approach using legacy soil samples to improve spectral soil information in a regional s...

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Main Authors: Elisângela Benedet Silva, Élvio Giasson, André Carnieletto Dotto, Alexandre ten Caten, José Alexandre Melo Demattê, Ivan Luiz Zilli Bacic, Milton da Veiga
Format: Article
Language:English
Published: Sociedade Brasileira de Ciência do Solo
Series:Revista Brasileira de Ciência do Solo
Subjects:
Online Access:http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-06832019000100304&lng=en&tlng=en
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spelling doaj-0b17541b24864b3faee7448e84f9f7a12021-01-02T10:29:42ZengSociedade Brasileira de Ciência do SoloRevista Brasileira de Ciência do Solo1806-96574310.1590/18069657rbcs20180174S0100-06832019000100304A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern BrazilElisângela Benedet SilvaÉlvio GiassonAndré Carnieletto DottoAlexandre ten CatenJosé Alexandre Melo DemattêIvan Luiz Zilli BacicMilton da VeigaABSTRACT The success of soil prediction by VIS-NIR-SWIR spectroscopy has led to considerable investment in large soil spectral libraries. The aims of this study were 1) to develop a soil VIS-NIR-SWIR spectroscopy approach using legacy soil samples to improve spectral soil information in a regional scale; (2) to compare six spectral preprocessing techniques; and (3) to compare the performance of linear and non-linear multivariate models for prediction of sand and clay content. A total of 1,534 legacy soil samples, stored by Epagri, were collected from agricultural areas in 2009 on a regional scale, covering 260 municipalities of Santa Catarina. Six spectral preprocessing techniques were applied and compared with reflectance spectra (control treatment) in the development of sand and clay prediction models. Five multivariate regression models, Support Vector Machines, Gaussian Process Regression, Cubist, Random Forest, and Partial Least Square Regression were compared. The scatter-corrective preprocessing groups produced similar or better performance than spectral-derivatives. In addition, preprocessing spectra prior to regression analysis does not improve sand prediction, since reflectance spectra achieved the best performance using Cubist, SVM, and PLS models. In general, clay content presented better prediction accuracy than sand content. The best multivariate model to predict sand and clay content from soil VIS-NIR-SWIR spectra was Cubist. The best Cubist performance was achieved combined with reflectance spectra (R2 = 0.73; root mean square error = 10.60 %; ratio of the performance to the interquartile range = 2.36) and MSC (R2 = 0.83; root mean square error = 7.29 %; ratio of the performance to the interquartile range = 3.70) for sand and clay content, respectively. Considering the mean RMSE values of the validation set, the predictive ability of the multivariate models decreased in the following order: Cubist>PLS>RF>GPR>SVM for both properties. The predictive ability of VIS-NIR-SWIR reflectance spectroscopy achieved in this study for sand and clay content using legacy soil data and heterogeneous samples confirmed the potential of the spectroscopy approach.http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-06832019000100304&lng=en&tlng=ensoil spectral librarymultivariate modelspreprocessing techniquesSanta Catarina
collection DOAJ
language English
format Article
sources DOAJ
author Elisângela Benedet Silva
Élvio Giasson
André Carnieletto Dotto
Alexandre ten Caten
José Alexandre Melo Demattê
Ivan Luiz Zilli Bacic
Milton da Veiga
spellingShingle Elisângela Benedet Silva
Élvio Giasson
André Carnieletto Dotto
Alexandre ten Caten
José Alexandre Melo Demattê
Ivan Luiz Zilli Bacic
Milton da Veiga
A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil
Revista Brasileira de Ciência do Solo
soil spectral library
multivariate models
preprocessing techniques
Santa Catarina
author_facet Elisângela Benedet Silva
Élvio Giasson
André Carnieletto Dotto
Alexandre ten Caten
José Alexandre Melo Demattê
Ivan Luiz Zilli Bacic
Milton da Veiga
author_sort Elisângela Benedet Silva
title A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil
title_short A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil
title_full A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil
title_fullStr A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil
title_full_unstemmed A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil
title_sort regional legacy soil dataset for prediction of sand and clay content with vis-nir-swir, in southern brazil
publisher Sociedade Brasileira de Ciência do Solo
series Revista Brasileira de Ciência do Solo
issn 1806-9657
description ABSTRACT The success of soil prediction by VIS-NIR-SWIR spectroscopy has led to considerable investment in large soil spectral libraries. The aims of this study were 1) to develop a soil VIS-NIR-SWIR spectroscopy approach using legacy soil samples to improve spectral soil information in a regional scale; (2) to compare six spectral preprocessing techniques; and (3) to compare the performance of linear and non-linear multivariate models for prediction of sand and clay content. A total of 1,534 legacy soil samples, stored by Epagri, were collected from agricultural areas in 2009 on a regional scale, covering 260 municipalities of Santa Catarina. Six spectral preprocessing techniques were applied and compared with reflectance spectra (control treatment) in the development of sand and clay prediction models. Five multivariate regression models, Support Vector Machines, Gaussian Process Regression, Cubist, Random Forest, and Partial Least Square Regression were compared. The scatter-corrective preprocessing groups produced similar or better performance than spectral-derivatives. In addition, preprocessing spectra prior to regression analysis does not improve sand prediction, since reflectance spectra achieved the best performance using Cubist, SVM, and PLS models. In general, clay content presented better prediction accuracy than sand content. The best multivariate model to predict sand and clay content from soil VIS-NIR-SWIR spectra was Cubist. The best Cubist performance was achieved combined with reflectance spectra (R2 = 0.73; root mean square error = 10.60 %; ratio of the performance to the interquartile range = 2.36) and MSC (R2 = 0.83; root mean square error = 7.29 %; ratio of the performance to the interquartile range = 3.70) for sand and clay content, respectively. Considering the mean RMSE values of the validation set, the predictive ability of the multivariate models decreased in the following order: Cubist>PLS>RF>GPR>SVM for both properties. The predictive ability of VIS-NIR-SWIR reflectance spectroscopy achieved in this study for sand and clay content using legacy soil data and heterogeneous samples confirmed the potential of the spectroscopy approach.
topic soil spectral library
multivariate models
preprocessing techniques
Santa Catarina
url http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-06832019000100304&lng=en&tlng=en
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