A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil
ABSTRACT The success of soil prediction by VIS-NIR-SWIR spectroscopy has led to considerable investment in large soil spectral libraries. The aims of this study were 1) to develop a soil VIS-NIR-SWIR spectroscopy approach using legacy soil samples to improve spectral soil information in a regional s...
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doaj-0b17541b24864b3faee7448e84f9f7a12021-01-02T10:29:42ZengSociedade Brasileira de Ciência do SoloRevista Brasileira de Ciência do Solo1806-96574310.1590/18069657rbcs20180174S0100-06832019000100304A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern BrazilElisângela Benedet SilvaÉlvio GiassonAndré Carnieletto DottoAlexandre ten CatenJosé Alexandre Melo DemattêIvan Luiz Zilli BacicMilton da VeigaABSTRACT The success of soil prediction by VIS-NIR-SWIR spectroscopy has led to considerable investment in large soil spectral libraries. The aims of this study were 1) to develop a soil VIS-NIR-SWIR spectroscopy approach using legacy soil samples to improve spectral soil information in a regional scale; (2) to compare six spectral preprocessing techniques; and (3) to compare the performance of linear and non-linear multivariate models for prediction of sand and clay content. A total of 1,534 legacy soil samples, stored by Epagri, were collected from agricultural areas in 2009 on a regional scale, covering 260 municipalities of Santa Catarina. Six spectral preprocessing techniques were applied and compared with reflectance spectra (control treatment) in the development of sand and clay prediction models. Five multivariate regression models, Support Vector Machines, Gaussian Process Regression, Cubist, Random Forest, and Partial Least Square Regression were compared. The scatter-corrective preprocessing groups produced similar or better performance than spectral-derivatives. In addition, preprocessing spectra prior to regression analysis does not improve sand prediction, since reflectance spectra achieved the best performance using Cubist, SVM, and PLS models. In general, clay content presented better prediction accuracy than sand content. The best multivariate model to predict sand and clay content from soil VIS-NIR-SWIR spectra was Cubist. The best Cubist performance was achieved combined with reflectance spectra (R2 = 0.73; root mean square error = 10.60 %; ratio of the performance to the interquartile range = 2.36) and MSC (R2 = 0.83; root mean square error = 7.29 %; ratio of the performance to the interquartile range = 3.70) for sand and clay content, respectively. Considering the mean RMSE values of the validation set, the predictive ability of the multivariate models decreased in the following order: Cubist>PLS>RF>GPR>SVM for both properties. The predictive ability of VIS-NIR-SWIR reflectance spectroscopy achieved in this study for sand and clay content using legacy soil data and heterogeneous samples confirmed the potential of the spectroscopy approach.http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-06832019000100304&lng=en&tlng=ensoil spectral librarymultivariate modelspreprocessing techniquesSanta Catarina |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Elisângela Benedet Silva Élvio Giasson André Carnieletto Dotto Alexandre ten Caten José Alexandre Melo Demattê Ivan Luiz Zilli Bacic Milton da Veiga |
spellingShingle |
Elisângela Benedet Silva Élvio Giasson André Carnieletto Dotto Alexandre ten Caten José Alexandre Melo Demattê Ivan Luiz Zilli Bacic Milton da Veiga A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil Revista Brasileira de Ciência do Solo soil spectral library multivariate models preprocessing techniques Santa Catarina |
author_facet |
Elisângela Benedet Silva Élvio Giasson André Carnieletto Dotto Alexandre ten Caten José Alexandre Melo Demattê Ivan Luiz Zilli Bacic Milton da Veiga |
author_sort |
Elisângela Benedet Silva |
title |
A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil |
title_short |
A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil |
title_full |
A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil |
title_fullStr |
A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil |
title_full_unstemmed |
A Regional Legacy Soil Dataset for Prediction of Sand and Clay Content with Vis-Nir-Swir, in Southern Brazil |
title_sort |
regional legacy soil dataset for prediction of sand and clay content with vis-nir-swir, in southern brazil |
publisher |
Sociedade Brasileira de Ciência do Solo |
series |
Revista Brasileira de Ciência do Solo |
issn |
1806-9657 |
description |
ABSTRACT The success of soil prediction by VIS-NIR-SWIR spectroscopy has led to considerable investment in large soil spectral libraries. The aims of this study were 1) to develop a soil VIS-NIR-SWIR spectroscopy approach using legacy soil samples to improve spectral soil information in a regional scale; (2) to compare six spectral preprocessing techniques; and (3) to compare the performance of linear and non-linear multivariate models for prediction of sand and clay content. A total of 1,534 legacy soil samples, stored by Epagri, were collected from agricultural areas in 2009 on a regional scale, covering 260 municipalities of Santa Catarina. Six spectral preprocessing techniques were applied and compared with reflectance spectra (control treatment) in the development of sand and clay prediction models. Five multivariate regression models, Support Vector Machines, Gaussian Process Regression, Cubist, Random Forest, and Partial Least Square Regression were compared. The scatter-corrective preprocessing groups produced similar or better performance than spectral-derivatives. In addition, preprocessing spectra prior to regression analysis does not improve sand prediction, since reflectance spectra achieved the best performance using Cubist, SVM, and PLS models. In general, clay content presented better prediction accuracy than sand content. The best multivariate model to predict sand and clay content from soil VIS-NIR-SWIR spectra was Cubist. The best Cubist performance was achieved combined with reflectance spectra (R2 = 0.73; root mean square error = 10.60 %; ratio of the performance to the interquartile range = 2.36) and MSC (R2 = 0.83; root mean square error = 7.29 %; ratio of the performance to the interquartile range = 3.70) for sand and clay content, respectively. Considering the mean RMSE values of the validation set, the predictive ability of the multivariate models decreased in the following order: Cubist>PLS>RF>GPR>SVM for both properties. The predictive ability of VIS-NIR-SWIR reflectance spectroscopy achieved in this study for sand and clay content using legacy soil data and heterogeneous samples confirmed the potential of the spectroscopy approach. |
topic |
soil spectral library multivariate models preprocessing techniques Santa Catarina |
url |
http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-06832019000100304&lng=en&tlng=en |
work_keys_str_mv |
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