CT radiomics facilitates more accurate diagnosis of COVID-19 pneumonia: compared with CO-RADS
Abstract Background Limited data was available for rapid and accurate detection of COVID-19 using CT-based machine learning model. This study aimed to investigate the value of chest CT radiomics for diagnosing COVID-19 pneumonia compared with clinical model and COVID-19 reporting and data system (CO...
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doaj-0a4fdb51c4e34110ac6bcce9b361013f2021-01-10T12:16:20ZengBMCJournal of Translational Medicine1479-58762021-01-0119111210.1186/s12967-020-02692-3CT radiomics facilitates more accurate diagnosis of COVID-19 pneumonia: compared with CO-RADSHuanhuan Liu0Hua Ren1Zengbin Wu2He Xu3Shuhai Zhang4Jinning Li5Liang Hou6Runmin Chi7Hui Zheng8Yanhong Chen9Shaofeng Duan10Huimin Li11Zongyu Xie12Dengbin Wang13Department of Radiology, Xinhua Hospital, Shanghai Jiao Tong University School of MedicineDepartment of Radiology, Xinhua Hospital, Shanghai Jiao Tong University School of MedicineDepartment of Emergency, Xinhua Hospital, Shanghai Jiao Tong University School of MedicineDepartment of Radiology, The First Affiliated Hospital of Bengbu Medical CollegeDepartment of Radiology, The First Affiliated Hospital of Bengbu Medical CollegeDepartment of Radiology, Xinhua Hospital, Shanghai Jiao Tong University School of MedicineDepartment of Radiology, Xinhua Hospital, Shanghai Jiao Tong University School of MedicineDepartment of Radiology, Xinhua Hospital, Shanghai Jiao Tong University School of MedicineDepartment of Radiology, Xinhua Hospital, Shanghai Jiao Tong University School of MedicineDepartment of Radiology, Xinhua Hospital, Shanghai Jiao Tong University School of MedicineGE HealthcareDepartment of Radiology, Xinhua Hospital, Shanghai Jiao Tong University School of MedicineDepartment of Radiology, The First Affiliated Hospital of Bengbu Medical CollegeDepartment of Radiology, Xinhua Hospital, Shanghai Jiao Tong University School of MedicineAbstract Background Limited data was available for rapid and accurate detection of COVID-19 using CT-based machine learning model. This study aimed to investigate the value of chest CT radiomics for diagnosing COVID-19 pneumonia compared with clinical model and COVID-19 reporting and data system (CO-RADS), and develop an open-source diagnostic tool with the constructed radiomics model. Methods This study enrolled 115 laboratory-confirmed COVID-19 and 435 non-COVID-19 pneumonia patients (training dataset, n = 379; validation dataset, n = 131; testing dataset, n = 40). Key radiomics features extracted from chest CT images were selected to build a radiomics signature using least absolute shrinkage and selection operator (LASSO) regression. Clinical and clinico-radiomics combined models were constructed. The combined model was further validated in the viral pneumonia cohort, and compared with performance of two radiologists using CO-RADS. The diagnostic performance was assessed by receiver operating characteristics curve (ROC) analysis, calibration curve, and decision curve analysis (DCA). Results Eight radiomics features and 5 clinical variables were selected to construct the combined radiomics model, which outperformed the clinical model in diagnosing COVID-19 pneumonia with an area under the ROC (AUC) of 0.98 and good calibration in the validation cohort. The combined model also performed better in distinguishing COVID-19 from other viral pneumonia with an AUC of 0.93 compared with 0.75 (P = 0.03) for clinical model, and 0.69 (P = 0.008) or 0.82 (P = 0.15) for two trained radiologists using CO-RADS. The sensitivity and specificity of the combined model can be achieved to 0.85 and 0.90. The DCA confirmed the clinical utility of the combined model. An easy-to-use open-source diagnostic tool was developed using the combined model. Conclusions The combined radiomics model outperformed clinical model and CO-RADS for diagnosing COVID-19 pneumonia, which can facilitate more rapid and accurate detection.https://doi.org/10.1186/s12967-020-02692-3COVID-19Computed tomographyPneumoniaRadiomicsMachine learning |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Huanhuan Liu Hua Ren Zengbin Wu He Xu Shuhai Zhang Jinning Li Liang Hou Runmin Chi Hui Zheng Yanhong Chen Shaofeng Duan Huimin Li Zongyu Xie Dengbin Wang |
spellingShingle |
Huanhuan Liu Hua Ren Zengbin Wu He Xu Shuhai Zhang Jinning Li Liang Hou Runmin Chi Hui Zheng Yanhong Chen Shaofeng Duan Huimin Li Zongyu Xie Dengbin Wang CT radiomics facilitates more accurate diagnosis of COVID-19 pneumonia: compared with CO-RADS Journal of Translational Medicine COVID-19 Computed tomography Pneumonia Radiomics Machine learning |
author_facet |
Huanhuan Liu Hua Ren Zengbin Wu He Xu Shuhai Zhang Jinning Li Liang Hou Runmin Chi Hui Zheng Yanhong Chen Shaofeng Duan Huimin Li Zongyu Xie Dengbin Wang |
author_sort |
Huanhuan Liu |
title |
CT radiomics facilitates more accurate diagnosis of COVID-19 pneumonia: compared with CO-RADS |
title_short |
CT radiomics facilitates more accurate diagnosis of COVID-19 pneumonia: compared with CO-RADS |
title_full |
CT radiomics facilitates more accurate diagnosis of COVID-19 pneumonia: compared with CO-RADS |
title_fullStr |
CT radiomics facilitates more accurate diagnosis of COVID-19 pneumonia: compared with CO-RADS |
title_full_unstemmed |
CT radiomics facilitates more accurate diagnosis of COVID-19 pneumonia: compared with CO-RADS |
title_sort |
ct radiomics facilitates more accurate diagnosis of covid-19 pneumonia: compared with co-rads |
publisher |
BMC |
series |
Journal of Translational Medicine |
issn |
1479-5876 |
publishDate |
2021-01-01 |
description |
Abstract Background Limited data was available for rapid and accurate detection of COVID-19 using CT-based machine learning model. This study aimed to investigate the value of chest CT radiomics for diagnosing COVID-19 pneumonia compared with clinical model and COVID-19 reporting and data system (CO-RADS), and develop an open-source diagnostic tool with the constructed radiomics model. Methods This study enrolled 115 laboratory-confirmed COVID-19 and 435 non-COVID-19 pneumonia patients (training dataset, n = 379; validation dataset, n = 131; testing dataset, n = 40). Key radiomics features extracted from chest CT images were selected to build a radiomics signature using least absolute shrinkage and selection operator (LASSO) regression. Clinical and clinico-radiomics combined models were constructed. The combined model was further validated in the viral pneumonia cohort, and compared with performance of two radiologists using CO-RADS. The diagnostic performance was assessed by receiver operating characteristics curve (ROC) analysis, calibration curve, and decision curve analysis (DCA). Results Eight radiomics features and 5 clinical variables were selected to construct the combined radiomics model, which outperformed the clinical model in diagnosing COVID-19 pneumonia with an area under the ROC (AUC) of 0.98 and good calibration in the validation cohort. The combined model also performed better in distinguishing COVID-19 from other viral pneumonia with an AUC of 0.93 compared with 0.75 (P = 0.03) for clinical model, and 0.69 (P = 0.008) or 0.82 (P = 0.15) for two trained radiologists using CO-RADS. The sensitivity and specificity of the combined model can be achieved to 0.85 and 0.90. The DCA confirmed the clinical utility of the combined model. An easy-to-use open-source diagnostic tool was developed using the combined model. Conclusions The combined radiomics model outperformed clinical model and CO-RADS for diagnosing COVID-19 pneumonia, which can facilitate more rapid and accurate detection. |
topic |
COVID-19 Computed tomography Pneumonia Radiomics Machine learning |
url |
https://doi.org/10.1186/s12967-020-02692-3 |
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