Draft genome sequence of Micrococcus luteus strain O'Kane implicates metabolic versatility and the potential to degrade polyhydroxybutyrates

Draft genome sequence of Micrococcus luteus strain O'Kane implicates metabolic versatility and the potential to degrade polyhydroxybutyrates

Micrococcus luteus is a predominant member of skin microbiome. We here report on the genomic analysis of Micrococcus luteus strain O'Kane that was isolated from an elevator. The partial genome assembly of Micrococcus luteus strain O'Kane is 2.5 Mb with 2256 protein-coding genes and 62 RNA...

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Bibliographic Details
Main Authors: Radwa A. Hanafy, M.B. Couger, Kristina Baker, Chelsea Murphy, Shannon D. O'Kane, Connie Budd, Donald P. French, Wouter D. Hoff, Noha Youssef
Format: Article
Language:English
Published: Elsevier 2016-09-01
Series:Genomics Data
Subjects:
Micrococcus luteus
Draft genome
Detailed annotation
Student Initiated Microbial Discovery (SIMD) project
Metabolic versatility
Online Access:http://www.sciencedirect.com/science/article/pii/S2213596016301027
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spelling doaj-09dc62b4347b4dcab1e5fae967ce863e2020-11-25T02:07:01ZengElsevierGenomics Data2213-59602016-09-019C14815310.1016/j.gdata.2016.08.006Draft genome sequence of Micrococcus luteus strain O'Kane implicates metabolic versatility and the potential to degrade polyhydroxybutyratesRadwa A. Hanafy0M.B. Couger1Kristina Baker2Chelsea Murphy3Shannon D. O'Kane4Connie Budd5Donald P. French6Wouter D. Hoff7Noha Youssef8Department of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK, United StatesDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK, United StatesDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK, United StatesDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK, United StatesDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK, United StatesDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK, United StatesDepartment of Integrative Biology, Oklahoma State University, Stillwater, OK, United StatesDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK, United StatesDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK, United StatesMicrococcus luteus is a predominant member of skin microbiome. We here report on the genomic analysis of Micrococcus luteus strain O'Kane that was isolated from an elevator. The partial genome assembly of Micrococcus luteus strain O'Kane is 2.5 Mb with 2256 protein-coding genes and 62 RNA genes. Genomic analysis revealed metabolic versatility with genes involved in the metabolism and transport of glucose, galactose, fructose, mannose, alanine, aspartate, asparagine, glutamate, glutamine, glycine, serine, cysteine, methionine, arginine, proline, histidine, phenylalanine, and fatty acids. Genomic comparison to other M. luteus representatives identified the potential to degrade polyhydroxybutyrates, as well as several antibiotic resistance genes absent from other genomes.http://www.sciencedirect.com/science/article/pii/S2213596016301027Micrococcus luteusDraft genomeDetailed annotationStudent Initiated Microbial Discovery (SIMD) projectMetabolic versatility
collection DOAJ
language English
format Article
sources DOAJ
author Radwa A. Hanafy
M.B. Couger
Kristina Baker
Chelsea Murphy
Shannon D. O'Kane
Connie Budd
Donald P. French
Wouter D. Hoff
Noha Youssef
spellingShingle Radwa A. Hanafy
M.B. Couger
Kristina Baker
Chelsea Murphy
Shannon D. O'Kane
Connie Budd
Donald P. French
Wouter D. Hoff
Noha Youssef
Draft genome sequence of Micrococcus luteus strain O'Kane implicates metabolic versatility and the potential to degrade polyhydroxybutyrates
Genomics Data
Micrococcus luteus
Draft genome
Detailed annotation
Student Initiated Microbial Discovery (SIMD) project
Metabolic versatility
author_facet Radwa A. Hanafy
M.B. Couger
Kristina Baker
Chelsea Murphy
Shannon D. O'Kane
Connie Budd
Donald P. French
Wouter D. Hoff
Noha Youssef
author_sort Radwa A. Hanafy
title Draft genome sequence of Micrococcus luteus strain O'Kane implicates metabolic versatility and the potential to degrade polyhydroxybutyrates
title_short Draft genome sequence of Micrococcus luteus strain O'Kane implicates metabolic versatility and the potential to degrade polyhydroxybutyrates
title_full Draft genome sequence of Micrococcus luteus strain O'Kane implicates metabolic versatility and the potential to degrade polyhydroxybutyrates
title_fullStr Draft genome sequence of Micrococcus luteus strain O'Kane implicates metabolic versatility and the potential to degrade polyhydroxybutyrates
title_full_unstemmed Draft genome sequence of Micrococcus luteus strain O'Kane implicates metabolic versatility and the potential to degrade polyhydroxybutyrates
title_sort draft genome sequence of micrococcus luteus strain o'kane implicates metabolic versatility and the potential to degrade polyhydroxybutyrates
publisher Elsevier
series Genomics Data
issn 2213-5960
publishDate 2016-09-01
description Micrococcus luteus is a predominant member of skin microbiome. We here report on the genomic analysis of Micrococcus luteus strain O'Kane that was isolated from an elevator. The partial genome assembly of Micrococcus luteus strain O'Kane is 2.5 Mb with 2256 protein-coding genes and 62 RNA genes. Genomic analysis revealed metabolic versatility with genes involved in the metabolism and transport of glucose, galactose, fructose, mannose, alanine, aspartate, asparagine, glutamate, glutamine, glycine, serine, cysteine, methionine, arginine, proline, histidine, phenylalanine, and fatty acids. Genomic comparison to other M. luteus representatives identified the potential to degrade polyhydroxybutyrates, as well as several antibiotic resistance genes absent from other genomes.
topic Micrococcus luteus
Draft genome
Detailed annotation
Student Initiated Microbial Discovery (SIMD) project
Metabolic versatility
url http://www.sciencedirect.com/science/article/pii/S2213596016301027
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