Divergent Responses of the Diazotrophic Microbiome to Elevated CO2 in Two Rice Cultivars

The species-specific responses of plant growth to elevated atmospheric CO2 concentration (eCO2) could lead to N limitation and potentially influence the sustainability of ecosystem. Questions remain unanswered with regards to the response of soil N2-fixing community to eCO2 when developing high-yiel...

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Main Authors: Yongjie Yu, Jianwei Zhang, Evangelos Petropoulos, Marcos Q. Baluja, Chunwu Zhu, Jianguo Zhu, Xiangui Lin, Youzhi Feng
Format: Article
Language:English
Published: Frontiers Media S.A. 2018-06-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fmicb.2018.01139/full
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spelling doaj-09d4b561fe4742558d40f7dca484cd992020-11-24T21:22:59ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2018-06-01910.3389/fmicb.2018.01139361779Divergent Responses of the Diazotrophic Microbiome to Elevated CO2 in Two Rice CultivarsYongjie Yu0Yongjie Yu1Yongjie Yu2Jianwei Zhang3Evangelos Petropoulos4Marcos Q. Baluja5Chunwu Zhu6Jianguo Zhu7Xiangui Lin8Youzhi Feng9College of Applied Meteorology, Nanjing University of Information Science and Technology, Nanjing, ChinaState Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, ChinaSchool of Engineering, Newcastle University, Newcastle upon Tyne, United KingdomState Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, ChinaSchool of Engineering, Newcastle University, Newcastle upon Tyne, United KingdomSchool of Engineering, Newcastle University, Newcastle upon Tyne, United KingdomState Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, ChinaState Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, ChinaState Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, ChinaState Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, ChinaThe species-specific responses of plant growth to elevated atmospheric CO2 concentration (eCO2) could lead to N limitation and potentially influence the sustainability of ecosystem. Questions remain unanswered with regards to the response of soil N2-fixing community to eCO2 when developing high-yielding agroecosystem to dampen the future rate of increase in CO2 levels and associated climate warming. This study demonstrates the divergent eCO2 influences on the paddy diazotrophic community between weak- and strong-responsive rice cultivars. In response to eCO2, the diazotrophic abundance increased more for the strong-responsive cultivar treatments than for the weak-responsive ones. Only the strong-responsive cultivars decreased the alpha diversity and separated the composition of diazotrophic communities in response to eCO2. The topological indices of the ecological networks further highlighted the different co-occurrence patterns of the diazotrophic microbiome in rice cultivars under eCO2. Strong-responsive cultivars destabilized the diazotrophic community by complicating and centralizing the co-occurrence network as well as by shifting the hub species from Bradyrhizobium to Dechloromonas in response to eCO2. On the contrary, the network pattern of the weak-responsive cultivars was simplified and decentralized in response to eCO2, with the hub species shifting from Halorhodospira under aCO2 to Sideroxydans under eCO2. Collectively, the above information indicates that the strong-responsive cultivars could potentially undermine the belowground ecosystem from the diazotrophs perspective in response to eCO2. This information highlights that more attention should be paid to the stability of the belowground ecosystem when developing agricultural strategies to adapt prospective climatic scenarios by growing high-yielding crop cultivars under eCO2.https://www.frontiersin.org/article/10.3389/fmicb.2018.01139/fullelevated CO2nifHsoil diazotrophscommunity structureco-occurrence network
collection DOAJ
language English
format Article
sources DOAJ
author Yongjie Yu
Yongjie Yu
Yongjie Yu
Jianwei Zhang
Evangelos Petropoulos
Marcos Q. Baluja
Chunwu Zhu
Jianguo Zhu
Xiangui Lin
Youzhi Feng
spellingShingle Yongjie Yu
Yongjie Yu
Yongjie Yu
Jianwei Zhang
Evangelos Petropoulos
Marcos Q. Baluja
Chunwu Zhu
Jianguo Zhu
Xiangui Lin
Youzhi Feng
Divergent Responses of the Diazotrophic Microbiome to Elevated CO2 in Two Rice Cultivars
Frontiers in Microbiology
elevated CO2
nifH
soil diazotrophs
community structure
co-occurrence network
author_facet Yongjie Yu
Yongjie Yu
Yongjie Yu
Jianwei Zhang
Evangelos Petropoulos
Marcos Q. Baluja
Chunwu Zhu
Jianguo Zhu
Xiangui Lin
Youzhi Feng
author_sort Yongjie Yu
title Divergent Responses of the Diazotrophic Microbiome to Elevated CO2 in Two Rice Cultivars
title_short Divergent Responses of the Diazotrophic Microbiome to Elevated CO2 in Two Rice Cultivars
title_full Divergent Responses of the Diazotrophic Microbiome to Elevated CO2 in Two Rice Cultivars
title_fullStr Divergent Responses of the Diazotrophic Microbiome to Elevated CO2 in Two Rice Cultivars
title_full_unstemmed Divergent Responses of the Diazotrophic Microbiome to Elevated CO2 in Two Rice Cultivars
title_sort divergent responses of the diazotrophic microbiome to elevated co2 in two rice cultivars
publisher Frontiers Media S.A.
series Frontiers in Microbiology
issn 1664-302X
publishDate 2018-06-01
description The species-specific responses of plant growth to elevated atmospheric CO2 concentration (eCO2) could lead to N limitation and potentially influence the sustainability of ecosystem. Questions remain unanswered with regards to the response of soil N2-fixing community to eCO2 when developing high-yielding agroecosystem to dampen the future rate of increase in CO2 levels and associated climate warming. This study demonstrates the divergent eCO2 influences on the paddy diazotrophic community between weak- and strong-responsive rice cultivars. In response to eCO2, the diazotrophic abundance increased more for the strong-responsive cultivar treatments than for the weak-responsive ones. Only the strong-responsive cultivars decreased the alpha diversity and separated the composition of diazotrophic communities in response to eCO2. The topological indices of the ecological networks further highlighted the different co-occurrence patterns of the diazotrophic microbiome in rice cultivars under eCO2. Strong-responsive cultivars destabilized the diazotrophic community by complicating and centralizing the co-occurrence network as well as by shifting the hub species from Bradyrhizobium to Dechloromonas in response to eCO2. On the contrary, the network pattern of the weak-responsive cultivars was simplified and decentralized in response to eCO2, with the hub species shifting from Halorhodospira under aCO2 to Sideroxydans under eCO2. Collectively, the above information indicates that the strong-responsive cultivars could potentially undermine the belowground ecosystem from the diazotrophs perspective in response to eCO2. This information highlights that more attention should be paid to the stability of the belowground ecosystem when developing agricultural strategies to adapt prospective climatic scenarios by growing high-yielding crop cultivars under eCO2.
topic elevated CO2
nifH
soil diazotrophs
community structure
co-occurrence network
url https://www.frontiersin.org/article/10.3389/fmicb.2018.01139/full
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