DNA Aptamers for the Functionalisation of DNA Origami Nanostructures

DNA origami has emerged in recent years as a powerful technique for designing and building 2D and 3D nanostructures. While the breadth of structures that have been produced is impressive, one of the remaining challenges, especially for DNA origami structures that are intended to carry out useful bio...

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Main Authors: Yusuke Sakai, Md. Sirajul Islam, Martyna Adamiak, Simon Chi-Chin Shiu, Julian Alexander Tanner, Jonathan Gardiner Heddle
Format: Article
Language:English
Published: MDPI AG 2018-11-01
Series:Genes
Subjects:
Online Access:https://www.mdpi.com/2073-4425/9/12/571
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spelling doaj-09a6ba1a8fab472ca7e460faa72c0baf2020-11-24T21:21:07ZengMDPI AGGenes2073-44252018-11-0191257110.3390/genes9120571genes9120571DNA Aptamers for the Functionalisation of DNA Origami NanostructuresYusuke Sakai0Md. Sirajul Islam1Martyna Adamiak2Simon Chi-Chin Shiu3Julian Alexander Tanner4Jonathan Gardiner Heddle5Malopolska Centre of Biotechnology, Jagiellonian University, 30-387 Krakow, PolandMalopolska Centre of Biotechnology, Jagiellonian University, 30-387 Krakow, PolandMalopolska Centre of Biotechnology, Jagiellonian University, 30-387 Krakow, PolandSchool of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong, ChinaSchool of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong, ChinaMalopolska Centre of Biotechnology, Jagiellonian University, 30-387 Krakow, PolandDNA origami has emerged in recent years as a powerful technique for designing and building 2D and 3D nanostructures. While the breadth of structures that have been produced is impressive, one of the remaining challenges, especially for DNA origami structures that are intended to carry out useful biomedical tasks in vivo, is to endow them with the ability to detect and respond to molecules of interest. Target molecules may be disease indicators or cell surface receptors, and the responses may include conformational changes leading to the release of therapeutically relevant cargo. Nucleic acid aptamers are ideally suited to this task and are beginning to be used in DNA origami designs. In this review, we consider examples of uses of DNA aptamers in DNA origami structures and summarise what is currently understood regarding aptamer-origami integration. We review three major roles for aptamers in such applications: protein immobilisation, triggering of structural transformation, and cell targeting. Finally, we consider future perspectives for DNA aptamer integration with DNA origami.https://www.mdpi.com/2073-4425/9/12/571DNA origamiaptamerDNA nanotechnologyprotein nano arraybiosensorlogic gateenzyme cascadedrug delivery systemtargeted therapymolecular robotics
collection DOAJ
language English
format Article
sources DOAJ
author Yusuke Sakai
Md. Sirajul Islam
Martyna Adamiak
Simon Chi-Chin Shiu
Julian Alexander Tanner
Jonathan Gardiner Heddle
spellingShingle Yusuke Sakai
Md. Sirajul Islam
Martyna Adamiak
Simon Chi-Chin Shiu
Julian Alexander Tanner
Jonathan Gardiner Heddle
DNA Aptamers for the Functionalisation of DNA Origami Nanostructures
Genes
DNA origami
aptamer
DNA nanotechnology
protein nano array
biosensor
logic gate
enzyme cascade
drug delivery system
targeted therapy
molecular robotics
author_facet Yusuke Sakai
Md. Sirajul Islam
Martyna Adamiak
Simon Chi-Chin Shiu
Julian Alexander Tanner
Jonathan Gardiner Heddle
author_sort Yusuke Sakai
title DNA Aptamers for the Functionalisation of DNA Origami Nanostructures
title_short DNA Aptamers for the Functionalisation of DNA Origami Nanostructures
title_full DNA Aptamers for the Functionalisation of DNA Origami Nanostructures
title_fullStr DNA Aptamers for the Functionalisation of DNA Origami Nanostructures
title_full_unstemmed DNA Aptamers for the Functionalisation of DNA Origami Nanostructures
title_sort dna aptamers for the functionalisation of dna origami nanostructures
publisher MDPI AG
series Genes
issn 2073-4425
publishDate 2018-11-01
description DNA origami has emerged in recent years as a powerful technique for designing and building 2D and 3D nanostructures. While the breadth of structures that have been produced is impressive, one of the remaining challenges, especially for DNA origami structures that are intended to carry out useful biomedical tasks in vivo, is to endow them with the ability to detect and respond to molecules of interest. Target molecules may be disease indicators or cell surface receptors, and the responses may include conformational changes leading to the release of therapeutically relevant cargo. Nucleic acid aptamers are ideally suited to this task and are beginning to be used in DNA origami designs. In this review, we consider examples of uses of DNA aptamers in DNA origami structures and summarise what is currently understood regarding aptamer-origami integration. We review three major roles for aptamers in such applications: protein immobilisation, triggering of structural transformation, and cell targeting. Finally, we consider future perspectives for DNA aptamer integration with DNA origami.
topic DNA origami
aptamer
DNA nanotechnology
protein nano array
biosensor
logic gate
enzyme cascade
drug delivery system
targeted therapy
molecular robotics
url https://www.mdpi.com/2073-4425/9/12/571
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