Molecular dating of caprines using ancient DNA sequences of <it>Myotragus balearicus</it>, an extinct endemic Balearic mammal
<p>Abstract</p> <p>Background</p> <p><it>Myotragus balearicus </it>was an endemic bovid from the Balearic Islands (Western Mediterranean) that became extinct around 6,000-4,000 years ago. The <it>Myotragus </it>evolutionary lineage became isolate...
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doaj-08f71b02689f48c7be1c5a2679deb9672021-09-02T15:17:19ZengBMCBMC Evolutionary Biology1471-21482005-12-01517010.1186/1471-2148-5-70Molecular dating of caprines using ancient DNA sequences of <it>Myotragus balearicus</it>, an extinct endemic Balearic mammalAlcover Josep AntoniMarquès-Bonet TomàsSampietro LourdesCastresana JoseLalueza-Fox CarlesBertranpetit Jaume<p>Abstract</p> <p>Background</p> <p><it>Myotragus balearicus </it>was an endemic bovid from the Balearic Islands (Western Mediterranean) that became extinct around 6,000-4,000 years ago. The <it>Myotragus </it>evolutionary lineage became isolated in the islands most probably at the end of the Messinian crisis, when the desiccation of the Mediterranean ended, in a geological date established at 5.35 Mya. Thus, the sequences of <it>Myotragus </it>could be very valuable for calibrating the mammalian mitochondrial DNA clock and, in particular, the tree of the Caprinae subfamily, to which <it>Myotragus </it>belongs.</p> <p>Results</p> <p>We have retrieved the complete mitochondrial cytochrome <it>b </it>gene (1,143 base pairs), plus fragments of the mitochondrial 12S gene and the nuclear 28S rDNA multi-copy gene from a well preserved <it>Myotragus </it>subfossil bone. The best resolved phylogenetic trees, obtained with the cytochrome <it>b </it>gene, placed <it>Myotragus </it>in a position basal to the <it>Ovis </it>group. Using the calibration provided by the isolation of Balearic Islands, we calculated that the initial radiation of caprines can be dated at 6.2 ± 0.4 Mya. In addition, alpine and southern chamois, considered until recently the same species, split around 1.6 ± 0.3 Mya, indicating that the two chamois species have been separated much longer than previously thought.</p> <p>Conclusion</p> <p>Since there are almost no extant endemic mammals in Mediterranean islands, the sequence of the extinct Balearic endemic <it>Myotragus </it>has been crucial for allowing us to use the Messinian crisis calibration point for dating the caprines phylogenetic tree.</p> http://www.biomedcentral.com/1471-2148/5/70 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Alcover Josep Antoni Marquès-Bonet Tomàs Sampietro Lourdes Castresana Jose Lalueza-Fox Carles Bertranpetit Jaume |
spellingShingle |
Alcover Josep Antoni Marquès-Bonet Tomàs Sampietro Lourdes Castresana Jose Lalueza-Fox Carles Bertranpetit Jaume Molecular dating of caprines using ancient DNA sequences of <it>Myotragus balearicus</it>, an extinct endemic Balearic mammal BMC Evolutionary Biology |
author_facet |
Alcover Josep Antoni Marquès-Bonet Tomàs Sampietro Lourdes Castresana Jose Lalueza-Fox Carles Bertranpetit Jaume |
author_sort |
Alcover Josep Antoni |
title |
Molecular dating of caprines using ancient DNA sequences of <it>Myotragus balearicus</it>, an extinct endemic Balearic mammal |
title_short |
Molecular dating of caprines using ancient DNA sequences of <it>Myotragus balearicus</it>, an extinct endemic Balearic mammal |
title_full |
Molecular dating of caprines using ancient DNA sequences of <it>Myotragus balearicus</it>, an extinct endemic Balearic mammal |
title_fullStr |
Molecular dating of caprines using ancient DNA sequences of <it>Myotragus balearicus</it>, an extinct endemic Balearic mammal |
title_full_unstemmed |
Molecular dating of caprines using ancient DNA sequences of <it>Myotragus balearicus</it>, an extinct endemic Balearic mammal |
title_sort |
molecular dating of caprines using ancient dna sequences of <it>myotragus balearicus</it>, an extinct endemic balearic mammal |
publisher |
BMC |
series |
BMC Evolutionary Biology |
issn |
1471-2148 |
publishDate |
2005-12-01 |
description |
<p>Abstract</p> <p>Background</p> <p><it>Myotragus balearicus </it>was an endemic bovid from the Balearic Islands (Western Mediterranean) that became extinct around 6,000-4,000 years ago. The <it>Myotragus </it>evolutionary lineage became isolated in the islands most probably at the end of the Messinian crisis, when the desiccation of the Mediterranean ended, in a geological date established at 5.35 Mya. Thus, the sequences of <it>Myotragus </it>could be very valuable for calibrating the mammalian mitochondrial DNA clock and, in particular, the tree of the Caprinae subfamily, to which <it>Myotragus </it>belongs.</p> <p>Results</p> <p>We have retrieved the complete mitochondrial cytochrome <it>b </it>gene (1,143 base pairs), plus fragments of the mitochondrial 12S gene and the nuclear 28S rDNA multi-copy gene from a well preserved <it>Myotragus </it>subfossil bone. The best resolved phylogenetic trees, obtained with the cytochrome <it>b </it>gene, placed <it>Myotragus </it>in a position basal to the <it>Ovis </it>group. Using the calibration provided by the isolation of Balearic Islands, we calculated that the initial radiation of caprines can be dated at 6.2 ± 0.4 Mya. In addition, alpine and southern chamois, considered until recently the same species, split around 1.6 ± 0.3 Mya, indicating that the two chamois species have been separated much longer than previously thought.</p> <p>Conclusion</p> <p>Since there are almost no extant endemic mammals in Mediterranean islands, the sequence of the extinct Balearic endemic <it>Myotragus </it>has been crucial for allowing us to use the Messinian crisis calibration point for dating the caprines phylogenetic tree.</p> |
url |
http://www.biomedcentral.com/1471-2148/5/70 |
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