Hunting down frame shifts: Ecological analysis of diverse functional gene sequences

Hunting down frame shifts: Ecological analysis of diverse functional gene sequences

Functional gene ecological analyses using amplicon sequencing can be challenging as translated sequences are often burdened with shifted reading frames. The aim of this work was to evaluate several bioinformatics tools designed to correct errors which arise during sequencing in an effort to reduce t...

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Bibliographic Details
Main Authors: Michal eStrejcek, Qiong eWang, Jakub eRidl, Ondrej eUhlik
Format: Article
Language:English
Published: Frontiers Media S.A. 2015-11-01
Series:Frontiers in Microbiology
Subjects:
Frameshift
functional genes
Amplicon sequencing
Dioxygenase
FrameBot
Online Access:http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.01267/full

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