Dynamic calculation of ATP/O ratios measured using Magnesium Green (MgGr)™
Mitochondria generate aerobic cellular energy (i.e., ATP) through the reduction of oxygen to water via oxidative phosphorylation. The efficiency of this pathway can be measured by the phosphate/oxygen (ATP/O) ratio, which is the amount of ATP produced per oxygen atom reduced. This ratio thus provide...
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doaj-066587476243466fa7ed29c662e3d82c2021-09-23T04:39:27ZengElsevierMethodsX2215-01612021-01-018101520Dynamic calculation of ATP/O ratios measured using Magnesium Green (MgGr)™Hang Cheng0Daniel Munro1Matthew E. Pamenter2Department of Biology, University of Ottawa, Ottawa, ON, CanadaDepartment of Biology, University of Ottawa, Ottawa, ON, CanadaDepartment of Biology, University of Ottawa, Ottawa, ON, Canada; University of Ottawa Brain and Mind Research Institute, Ottawa, ON, Canada; Corresponding author.Mitochondria generate aerobic cellular energy (i.e., ATP) through the reduction of oxygen to water via oxidative phosphorylation. The efficiency of this pathway can be measured by the phosphate/oxygen (ATP/O) ratio, which is the amount of ATP produced per oxygen atom reduced. This ratio thus provides a measure of the efficiency of mitochondrial respiration that can be readily compared between species. The magnesium green (MgGr) fluorometric method permits easy measurement of ATP/O ratios from isolated mitochondria but the standard analysis approach employs an endpoint method to calculate ATP/O ratios. Here, we present a modified method of ATP/O calculation that permits dynamic observation of fluorescent measurements of the consumption of O2 (JO2) and the production of ATP (JATP). Specifically, by substituting the slope of a straight line within a given period of time (seconds to minutes) with the slope of a tangent to each time point (per second), it is possible to evaluate JO2, JATP and the ATP/O ratio in a dynamic manner. • Provides second-by-second visualization of ATP/O ratios throughout experiments vs. a single measurement. • Dynamic visualization allows for easy identification of outlying data and more accurate calculation of mean ATP/O ratios.http://www.sciencedirect.com/science/article/pii/S2215016121003137ATP productionOxygen consumptionFluorescenceMitochondrial efficiency |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Hang Cheng Daniel Munro Matthew E. Pamenter |
spellingShingle |
Hang Cheng Daniel Munro Matthew E. Pamenter Dynamic calculation of ATP/O ratios measured using Magnesium Green (MgGr)™ MethodsX ATP production Oxygen consumption Fluorescence Mitochondrial efficiency |
author_facet |
Hang Cheng Daniel Munro Matthew E. Pamenter |
author_sort |
Hang Cheng |
title |
Dynamic calculation of ATP/O ratios measured using Magnesium Green (MgGr)™ |
title_short |
Dynamic calculation of ATP/O ratios measured using Magnesium Green (MgGr)™ |
title_full |
Dynamic calculation of ATP/O ratios measured using Magnesium Green (MgGr)™ |
title_fullStr |
Dynamic calculation of ATP/O ratios measured using Magnesium Green (MgGr)™ |
title_full_unstemmed |
Dynamic calculation of ATP/O ratios measured using Magnesium Green (MgGr)™ |
title_sort |
dynamic calculation of atp/o ratios measured using magnesium green (mggr)™ |
publisher |
Elsevier |
series |
MethodsX |
issn |
2215-0161 |
publishDate |
2021-01-01 |
description |
Mitochondria generate aerobic cellular energy (i.e., ATP) through the reduction of oxygen to water via oxidative phosphorylation. The efficiency of this pathway can be measured by the phosphate/oxygen (ATP/O) ratio, which is the amount of ATP produced per oxygen atom reduced. This ratio thus provides a measure of the efficiency of mitochondrial respiration that can be readily compared between species. The magnesium green (MgGr) fluorometric method permits easy measurement of ATP/O ratios from isolated mitochondria but the standard analysis approach employs an endpoint method to calculate ATP/O ratios. Here, we present a modified method of ATP/O calculation that permits dynamic observation of fluorescent measurements of the consumption of O2 (JO2) and the production of ATP (JATP). Specifically, by substituting the slope of a straight line within a given period of time (seconds to minutes) with the slope of a tangent to each time point (per second), it is possible to evaluate JO2, JATP and the ATP/O ratio in a dynamic manner. • Provides second-by-second visualization of ATP/O ratios throughout experiments vs. a single measurement. • Dynamic visualization allows for easy identification of outlying data and more accurate calculation of mean ATP/O ratios. |
topic |
ATP production Oxygen consumption Fluorescence Mitochondrial efficiency |
url |
http://www.sciencedirect.com/science/article/pii/S2215016121003137 |
work_keys_str_mv |
AT hangcheng dynamiccalculationofatporatiosmeasuredusingmagnesiumgreenmggr AT danielmunro dynamiccalculationofatporatiosmeasuredusingmagnesiumgreenmggr AT matthewepamenter dynamiccalculationofatporatiosmeasuredusingmagnesiumgreenmggr |
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1717370754153054208 |