Fully Integrated Liquid-Core Waveguide Fluorescence Lifetime Detection Microsystem for DNA Biosensing

Time-resolved fluorescence is a widely adopted technique for DNA detection due to its high sensitivity and selectivity. However, due to stringent requirements on optics and electronics, instrumentation with time-resolved capability is bulky and expensive, prohibiting their use in portable and point-...

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Main Authors: Liping Wei, Hoi Man Leung, Yi Tian, Pik Kwan Lo, Derek Ho
Format: Article
Language:English
Published: IEEE 2019-01-01
Series:IEEE Access
Subjects:
Online Access:https://ieeexplore.ieee.org/document/8794832/
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spelling doaj-064310c3564340d692256a6242c8bbdf2021-04-05T17:21:36ZengIEEEIEEE Access2169-35362019-01-01711194411195310.1109/ACCESS.2019.29347648794832Fully Integrated Liquid-Core Waveguide Fluorescence Lifetime Detection Microsystem for DNA BiosensingLiping Wei0https://orcid.org/0000-0003-4453-682XHoi Man Leung1Yi Tian2https://orcid.org/0000-0002-2186-3038Pik Kwan Lo3Derek Ho4Department of Materials Science and Engineering, City University of Hong Kong, Hong KongDepartment of Chemistry, City University of Hong Kong, Hong KongDepartment of Materials Science and Engineering, City University of Hong Kong, Hong KongDepartment of Chemistry, City University of Hong Kong, Hong KongDepartment of Materials Science and Engineering, City University of Hong Kong, Hong KongTime-resolved fluorescence is a widely adopted technique for DNA detection due to its high sensitivity and selectivity. However, due to stringent requirements on optics and electronics, instrumentation with time-resolved capability is bulky and expensive, prohibiting their use in portable and point-of-care applications. In this work, a fully-integrated DNA biosensor based on liquid-core waveguide (LCW) optics for fluorescence lifetime analysis is presented. The DNA biosensor encompasses all-custom bioassay, optics and electronics into a microsystem, delivering a near sample-to-answer level of integration. Lifetime, rather than intensity, is exploited as the analytical signal from the V-carbazole probe for the first time. Excitation propagation within the LCW is investigated both analytically and in simulations to achieve high excitation rejection and low temporal dispersion, enabling the proposed LCW-based system with much smaller instrumentation size to deliver comparable lifetime measurement accuracy to traditional systems. Detection of DNA down to 15 base pairs at a low detection limit of 1.38 nM demonstrates the high applicability of the proposed biosensor for compact, application-specific, and low-cost diagnostics devices.https://ieeexplore.ieee.org/document/8794832/DNA biosensingfluorescence lifetime detectionliquid-core waveguideTCSPCturn-on fluorescent probe
collection DOAJ
language English
format Article
sources DOAJ
author Liping Wei
Hoi Man Leung
Yi Tian
Pik Kwan Lo
Derek Ho
spellingShingle Liping Wei
Hoi Man Leung
Yi Tian
Pik Kwan Lo
Derek Ho
Fully Integrated Liquid-Core Waveguide Fluorescence Lifetime Detection Microsystem for DNA Biosensing
IEEE Access
DNA biosensing
fluorescence lifetime detection
liquid-core waveguide
TCSPC
turn-on fluorescent probe
author_facet Liping Wei
Hoi Man Leung
Yi Tian
Pik Kwan Lo
Derek Ho
author_sort Liping Wei
title Fully Integrated Liquid-Core Waveguide Fluorescence Lifetime Detection Microsystem for DNA Biosensing
title_short Fully Integrated Liquid-Core Waveguide Fluorescence Lifetime Detection Microsystem for DNA Biosensing
title_full Fully Integrated Liquid-Core Waveguide Fluorescence Lifetime Detection Microsystem for DNA Biosensing
title_fullStr Fully Integrated Liquid-Core Waveguide Fluorescence Lifetime Detection Microsystem for DNA Biosensing
title_full_unstemmed Fully Integrated Liquid-Core Waveguide Fluorescence Lifetime Detection Microsystem for DNA Biosensing
title_sort fully integrated liquid-core waveguide fluorescence lifetime detection microsystem for dna biosensing
publisher IEEE
series IEEE Access
issn 2169-3536
publishDate 2019-01-01
description Time-resolved fluorescence is a widely adopted technique for DNA detection due to its high sensitivity and selectivity. However, due to stringent requirements on optics and electronics, instrumentation with time-resolved capability is bulky and expensive, prohibiting their use in portable and point-of-care applications. In this work, a fully-integrated DNA biosensor based on liquid-core waveguide (LCW) optics for fluorescence lifetime analysis is presented. The DNA biosensor encompasses all-custom bioassay, optics and electronics into a microsystem, delivering a near sample-to-answer level of integration. Lifetime, rather than intensity, is exploited as the analytical signal from the V-carbazole probe for the first time. Excitation propagation within the LCW is investigated both analytically and in simulations to achieve high excitation rejection and low temporal dispersion, enabling the proposed LCW-based system with much smaller instrumentation size to deliver comparable lifetime measurement accuracy to traditional systems. Detection of DNA down to 15 base pairs at a low detection limit of 1.38 nM demonstrates the high applicability of the proposed biosensor for compact, application-specific, and low-cost diagnostics devices.
topic DNA biosensing
fluorescence lifetime detection
liquid-core waveguide
TCSPC
turn-on fluorescent probe
url https://ieeexplore.ieee.org/document/8794832/
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AT hoimanleung fullyintegratedliquidcorewaveguidefluorescencelifetimedetectionmicrosystemfordnabiosensing
AT yitian fullyintegratedliquidcorewaveguidefluorescencelifetimedetectionmicrosystemfordnabiosensing
AT pikkwanlo fullyintegratedliquidcorewaveguidefluorescencelifetimedetectionmicrosystemfordnabiosensing
AT derekho fullyintegratedliquidcorewaveguidefluorescencelifetimedetectionmicrosystemfordnabiosensing
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