Comparative metabolic profiling of engineered Saccharomyces cerevisiae with enhanced flavonoids production

The engineered Saccharomyces cerevisiae strains with ARO4K229L-overexpression, PHA2-downregulation and ARO10/PDC5-knockouts, were previously shown to have enhanced accumulation of naringenin. To understand the mechanism behind this, comparative metabolomic analysis was performed, to gain a global ov...

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Main Authors: Xiaomei Lyu, Kuan Rei Ng, Rita Mark, Jie Lin Lee, Wei Ning Chen
Format: Article
Language:English
Published: Elsevier 2018-05-01
Series:Journal of Functional Foods
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S1756464618300987
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spelling doaj-04f24df8da784cbfb35a6035fbd44a922021-04-30T07:13:14ZengElsevierJournal of Functional Foods1756-46462018-05-0144274282Comparative metabolic profiling of engineered Saccharomyces cerevisiae with enhanced flavonoids productionXiaomei Lyu0Kuan Rei Ng1Rita Mark2Jie Lin Lee3Wei Ning Chen4School of Chemical and Biomedical Engineering, College of Engineering, Nanyang Technological University, 62 Nanyang Drive, Singapore 637459, SingaporeSchool of Chemical and Biomedical Engineering, College of Engineering, Nanyang Technological University, 62 Nanyang Drive, Singapore 637459, SingaporeSchool of Chemical and Biomedical Engineering, College of Engineering, Nanyang Technological University, 62 Nanyang Drive, Singapore 637459, SingaporeSchool of Chemical and Biomedical Engineering, College of Engineering, Nanyang Technological University, 62 Nanyang Drive, Singapore 637459, SingaporeCorresponding author.; School of Chemical and Biomedical Engineering, College of Engineering, Nanyang Technological University, 62 Nanyang Drive, Singapore 637459, SingaporeThe engineered Saccharomyces cerevisiae strains with ARO4K229L-overexpression, PHA2-downregulation and ARO10/PDC5-knockouts, were previously shown to have enhanced accumulation of naringenin. To understand the mechanism behind this, comparative metabolomic analysis was performed, to gain a global overview of the metabolic regulation. As a result, 20 important metabolites were found to be significantly altered. Specifically, the overexpression of ARO4K229L resulted in a decrease in cytoplasmic amino acids production and an increase in NADPH levels. This indicated that there was a downregulation of the glycolysis pathway, combined with an upregulation in the PPP pathway. In the PHA2-down regulated strain, metabolic changes were mainly confined to the flavonoid biosynthetic pathway. In the case of the ARO10/PDC5 knockout strain, significantly improved ATP levels and upregulation in the TCA cycle were observed. These results provided new evidence for the respiration inhibition of aromatic alcohol at the metabolic level, as a result of in vivo genetic engineering.http://www.sciencedirect.com/science/article/pii/S1756464618300987Metabolomic analysisFlavonoidsS. cerevisiaeRegulation mechanism
collection DOAJ
language English
format Article
sources DOAJ
author Xiaomei Lyu
Kuan Rei Ng
Rita Mark
Jie Lin Lee
Wei Ning Chen
spellingShingle Xiaomei Lyu
Kuan Rei Ng
Rita Mark
Jie Lin Lee
Wei Ning Chen
Comparative metabolic profiling of engineered Saccharomyces cerevisiae with enhanced flavonoids production
Journal of Functional Foods
Metabolomic analysis
Flavonoids
S. cerevisiae
Regulation mechanism
author_facet Xiaomei Lyu
Kuan Rei Ng
Rita Mark
Jie Lin Lee
Wei Ning Chen
author_sort Xiaomei Lyu
title Comparative metabolic profiling of engineered Saccharomyces cerevisiae with enhanced flavonoids production
title_short Comparative metabolic profiling of engineered Saccharomyces cerevisiae with enhanced flavonoids production
title_full Comparative metabolic profiling of engineered Saccharomyces cerevisiae with enhanced flavonoids production
title_fullStr Comparative metabolic profiling of engineered Saccharomyces cerevisiae with enhanced flavonoids production
title_full_unstemmed Comparative metabolic profiling of engineered Saccharomyces cerevisiae with enhanced flavonoids production
title_sort comparative metabolic profiling of engineered saccharomyces cerevisiae with enhanced flavonoids production
publisher Elsevier
series Journal of Functional Foods
issn 1756-4646
publishDate 2018-05-01
description The engineered Saccharomyces cerevisiae strains with ARO4K229L-overexpression, PHA2-downregulation and ARO10/PDC5-knockouts, were previously shown to have enhanced accumulation of naringenin. To understand the mechanism behind this, comparative metabolomic analysis was performed, to gain a global overview of the metabolic regulation. As a result, 20 important metabolites were found to be significantly altered. Specifically, the overexpression of ARO4K229L resulted in a decrease in cytoplasmic amino acids production and an increase in NADPH levels. This indicated that there was a downregulation of the glycolysis pathway, combined with an upregulation in the PPP pathway. In the PHA2-down regulated strain, metabolic changes were mainly confined to the flavonoid biosynthetic pathway. In the case of the ARO10/PDC5 knockout strain, significantly improved ATP levels and upregulation in the TCA cycle were observed. These results provided new evidence for the respiration inhibition of aromatic alcohol at the metabolic level, as a result of in vivo genetic engineering.
topic Metabolomic analysis
Flavonoids
S. cerevisiae
Regulation mechanism
url http://www.sciencedirect.com/science/article/pii/S1756464618300987
work_keys_str_mv AT xiaomeilyu comparativemetabolicprofilingofengineeredsaccharomycescerevisiaewithenhancedflavonoidsproduction
AT kuanreing comparativemetabolicprofilingofengineeredsaccharomycescerevisiaewithenhancedflavonoidsproduction
AT ritamark comparativemetabolicprofilingofengineeredsaccharomycescerevisiaewithenhancedflavonoidsproduction
AT jielinlee comparativemetabolicprofilingofengineeredsaccharomycescerevisiaewithenhancedflavonoidsproduction
AT weiningchen comparativemetabolicprofilingofengineeredsaccharomycescerevisiaewithenhancedflavonoidsproduction
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