Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle Area

The increasing demand of fish in the Coral Triangle Area has led to overexploitation of some species of fishes. One of the commercial fishes, which is also known to be the source of food and income for local communities, is the Mottled Spinefoot (Siganus fuscescens). Population studies on this speci...

Full description

Bibliographic Details
Main Authors: Ni Putu Dian Pertiwi, Nur Ismu Hidayat, Chloe Henderson, I Nyoman Giri Putra, Andrianus Sembiring
Format: Article
Language:English
Published: Diponegoro University; Association of Indonesian Coastal Management Experts 2019-02-01
Series:Ilmu Kelautan
Subjects:
Online Access:https://ejournal.undip.ac.id/index.php/ijms/article/view/22008
id doaj-04710363265643b8b5488d6bb64c6122
record_format Article
spelling doaj-04710363265643b8b5488d6bb64c61222021-09-15T05:49:43ZengDiponegoro University; Association of Indonesian Coastal Management ExpertsIlmu Kelautan0853-72912406-75982019-02-01241314010.14710/ik.ijms.24.1.31-4014599Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle AreaNi Putu Dian Pertiwi0Nur Ismu Hidayat1Chloe Henderson2I Nyoman Giri Putra3Andrianus Sembiring4Yayasan Biodiversitas Indonesia, IndonesiaConservation International, IndonesiaDepartment of Ecology and Evolutionary Biology, University of California, United StatesFaculty of Marine Science, Udayana University, IndonesiaYayasan Biodiversitas Indonesia, IndonesiaThe increasing demand of fish in the Coral Triangle Area has led to overexploitation of some species of fishes. One of the commercial fishes, which is also known to be the source of food and income for local communities, is the Mottled Spinefoot (Siganus fuscescens). Population studies on this species are important in order to manage sustainable stock populations. Genetic variation of the mitochondrial DNA was analyzed to examine the population structure of Siganus fuscescens in Indonesia, as part of the Coral Triangle Area. In total, 789 basepairs of control region mtDNA sequences were determined from 133 specimens collected from six localities, including Seribu Islands (n=27), Karimunjawa (n=19), Komodo (n=39), Selayar (n=20), Lembeh (n=19) and Luwuk (n=9). From the data, 27 variable sites and 24 haplotypes were detected, with most of the haplotypes unique to each location. Haplotype data show that one haplotype was shared among all populations, three haplotypes were shared between two populations (Komodo & Selayar; Lembeh & Seribu; Komodo & Karimunjawa), and 20 were unique to a single population. Haplotype diversity (h=0.444) and nucleotide diversity (π=0.00165) were low. The diversity result, i.e. the ΦST value (0.0658, P < 0.0001) revealed genetic structure in S. fuscescens populations in Indonesia. A non-dispersal strategy led to restricted gene flow and genetic structuring in S. fuscescens. However, both the neutrality test and the mismatch distribution indicated that S. fuscescens might have been in populations at demographic equilibrium, with restriction to the population expansion. Although indicating unexpected minor population structure pattern, the overall result still suggest the management of this species population as a single unit across Indonesia.https://ejournal.undip.ac.id/index.php/ijms/article/view/22008indonesiageneticsiganus sp.
collection DOAJ
language English
format Article
sources DOAJ
author Ni Putu Dian Pertiwi
Nur Ismu Hidayat
Chloe Henderson
I Nyoman Giri Putra
Andrianus Sembiring
spellingShingle Ni Putu Dian Pertiwi
Nur Ismu Hidayat
Chloe Henderson
I Nyoman Giri Putra
Andrianus Sembiring
Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle Area
Ilmu Kelautan
indonesia
genetic
siganus sp.
author_facet Ni Putu Dian Pertiwi
Nur Ismu Hidayat
Chloe Henderson
I Nyoman Giri Putra
Andrianus Sembiring
author_sort Ni Putu Dian Pertiwi
title Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle Area
title_short Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle Area
title_full Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle Area
title_fullStr Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle Area
title_full_unstemmed Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle Area
title_sort redefining dispersal boundaries of siganus fuscescens in the coral triangle area
publisher Diponegoro University; Association of Indonesian Coastal Management Experts
series Ilmu Kelautan
issn 0853-7291
2406-7598
publishDate 2019-02-01
description The increasing demand of fish in the Coral Triangle Area has led to overexploitation of some species of fishes. One of the commercial fishes, which is also known to be the source of food and income for local communities, is the Mottled Spinefoot (Siganus fuscescens). Population studies on this species are important in order to manage sustainable stock populations. Genetic variation of the mitochondrial DNA was analyzed to examine the population structure of Siganus fuscescens in Indonesia, as part of the Coral Triangle Area. In total, 789 basepairs of control region mtDNA sequences were determined from 133 specimens collected from six localities, including Seribu Islands (n=27), Karimunjawa (n=19), Komodo (n=39), Selayar (n=20), Lembeh (n=19) and Luwuk (n=9). From the data, 27 variable sites and 24 haplotypes were detected, with most of the haplotypes unique to each location. Haplotype data show that one haplotype was shared among all populations, three haplotypes were shared between two populations (Komodo & Selayar; Lembeh & Seribu; Komodo & Karimunjawa), and 20 were unique to a single population. Haplotype diversity (h=0.444) and nucleotide diversity (π=0.00165) were low. The diversity result, i.e. the ΦST value (0.0658, P < 0.0001) revealed genetic structure in S. fuscescens populations in Indonesia. A non-dispersal strategy led to restricted gene flow and genetic structuring in S. fuscescens. However, both the neutrality test and the mismatch distribution indicated that S. fuscescens might have been in populations at demographic equilibrium, with restriction to the population expansion. Although indicating unexpected minor population structure pattern, the overall result still suggest the management of this species population as a single unit across Indonesia.
topic indonesia
genetic
siganus sp.
url https://ejournal.undip.ac.id/index.php/ijms/article/view/22008
work_keys_str_mv AT niputudianpertiwi redefiningdispersalboundariesofsiganusfuscescensinthecoraltrianglearea
AT nurismuhidayat redefiningdispersalboundariesofsiganusfuscescensinthecoraltrianglearea
AT chloehenderson redefiningdispersalboundariesofsiganusfuscescensinthecoraltrianglearea
AT inyomangiriputra redefiningdispersalboundariesofsiganusfuscescensinthecoraltrianglearea
AT andrianussembiring redefiningdispersalboundariesofsiganusfuscescensinthecoraltrianglearea
_version_ 1717379188720140288