Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle Area
The increasing demand of fish in the Coral Triangle Area has led to overexploitation of some species of fishes. One of the commercial fishes, which is also known to be the source of food and income for local communities, is the Mottled Spinefoot (Siganus fuscescens). Population studies on this speci...
Main Authors: | , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Diponegoro University; Association of Indonesian Coastal Management Experts
2019-02-01
|
Series: | Ilmu Kelautan |
Subjects: | |
Online Access: | https://ejournal.undip.ac.id/index.php/ijms/article/view/22008 |
id |
doaj-04710363265643b8b5488d6bb64c6122 |
---|---|
record_format |
Article |
spelling |
doaj-04710363265643b8b5488d6bb64c61222021-09-15T05:49:43ZengDiponegoro University; Association of Indonesian Coastal Management ExpertsIlmu Kelautan0853-72912406-75982019-02-01241314010.14710/ik.ijms.24.1.31-4014599Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle AreaNi Putu Dian Pertiwi0Nur Ismu Hidayat1Chloe Henderson2I Nyoman Giri Putra3Andrianus Sembiring4Yayasan Biodiversitas Indonesia, IndonesiaConservation International, IndonesiaDepartment of Ecology and Evolutionary Biology, University of California, United StatesFaculty of Marine Science, Udayana University, IndonesiaYayasan Biodiversitas Indonesia, IndonesiaThe increasing demand of fish in the Coral Triangle Area has led to overexploitation of some species of fishes. One of the commercial fishes, which is also known to be the source of food and income for local communities, is the Mottled Spinefoot (Siganus fuscescens). Population studies on this species are important in order to manage sustainable stock populations. Genetic variation of the mitochondrial DNA was analyzed to examine the population structure of Siganus fuscescens in Indonesia, as part of the Coral Triangle Area. In total, 789 basepairs of control region mtDNA sequences were determined from 133 specimens collected from six localities, including Seribu Islands (n=27), Karimunjawa (n=19), Komodo (n=39), Selayar (n=20), Lembeh (n=19) and Luwuk (n=9). From the data, 27 variable sites and 24 haplotypes were detected, with most of the haplotypes unique to each location. Haplotype data show that one haplotype was shared among all populations, three haplotypes were shared between two populations (Komodo & Selayar; Lembeh & Seribu; Komodo & Karimunjawa), and 20 were unique to a single population. Haplotype diversity (h=0.444) and nucleotide diversity (π=0.00165) were low. The diversity result, i.e. the ΦST value (0.0658, P < 0.0001) revealed genetic structure in S. fuscescens populations in Indonesia. A non-dispersal strategy led to restricted gene flow and genetic structuring in S. fuscescens. However, both the neutrality test and the mismatch distribution indicated that S. fuscescens might have been in populations at demographic equilibrium, with restriction to the population expansion. Although indicating unexpected minor population structure pattern, the overall result still suggest the management of this species population as a single unit across Indonesia.https://ejournal.undip.ac.id/index.php/ijms/article/view/22008indonesiageneticsiganus sp. |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Ni Putu Dian Pertiwi Nur Ismu Hidayat Chloe Henderson I Nyoman Giri Putra Andrianus Sembiring |
spellingShingle |
Ni Putu Dian Pertiwi Nur Ismu Hidayat Chloe Henderson I Nyoman Giri Putra Andrianus Sembiring Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle Area Ilmu Kelautan indonesia genetic siganus sp. |
author_facet |
Ni Putu Dian Pertiwi Nur Ismu Hidayat Chloe Henderson I Nyoman Giri Putra Andrianus Sembiring |
author_sort |
Ni Putu Dian Pertiwi |
title |
Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle Area |
title_short |
Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle Area |
title_full |
Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle Area |
title_fullStr |
Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle Area |
title_full_unstemmed |
Redefining Dispersal Boundaries of Siganus fuscescens In The Coral Triangle Area |
title_sort |
redefining dispersal boundaries of siganus fuscescens in the coral triangle area |
publisher |
Diponegoro University; Association of Indonesian Coastal Management Experts |
series |
Ilmu Kelautan |
issn |
0853-7291 2406-7598 |
publishDate |
2019-02-01 |
description |
The increasing demand of fish in the Coral Triangle Area has led to overexploitation of some species of fishes. One of the commercial fishes, which is also known to be the source of food and income for local communities, is the Mottled Spinefoot (Siganus fuscescens). Population studies on this species are important in order to manage sustainable stock populations. Genetic variation of the mitochondrial DNA was analyzed to examine the population structure of Siganus fuscescens in Indonesia, as part of the Coral Triangle Area. In total, 789 basepairs of control region mtDNA sequences were determined from 133 specimens collected from six localities, including Seribu Islands (n=27), Karimunjawa (n=19), Komodo (n=39), Selayar (n=20), Lembeh (n=19) and Luwuk (n=9). From the data, 27 variable sites and 24 haplotypes were detected, with most of the haplotypes unique to each location. Haplotype data show that one haplotype was shared among all populations, three haplotypes were shared between two populations (Komodo & Selayar; Lembeh & Seribu; Komodo & Karimunjawa), and 20 were unique to a single population. Haplotype diversity (h=0.444) and nucleotide diversity (π=0.00165) were low. The diversity result, i.e. the ΦST value (0.0658, P < 0.0001) revealed genetic structure in S. fuscescens populations in Indonesia. A non-dispersal strategy led to restricted gene flow and genetic structuring in S. fuscescens. However, both the neutrality test and the mismatch distribution indicated that S. fuscescens might have been in populations at demographic equilibrium, with restriction to the population expansion. Although indicating unexpected minor population structure pattern, the overall result still suggest the management of this species population as a single unit across Indonesia. |
topic |
indonesia genetic siganus sp. |
url |
https://ejournal.undip.ac.id/index.php/ijms/article/view/22008 |
work_keys_str_mv |
AT niputudianpertiwi redefiningdispersalboundariesofsiganusfuscescensinthecoraltrianglearea AT nurismuhidayat redefiningdispersalboundariesofsiganusfuscescensinthecoraltrianglearea AT chloehenderson redefiningdispersalboundariesofsiganusfuscescensinthecoraltrianglearea AT inyomangiriputra redefiningdispersalboundariesofsiganusfuscescensinthecoraltrianglearea AT andrianussembiring redefiningdispersalboundariesofsiganusfuscescensinthecoraltrianglearea |
_version_ |
1717379188720140288 |