A dual transcript-discovery approach to improve the delimitation of gene features from RNA-seq data in the chicken model

A dual transcript-discovery approach to improve the delimitation of gene features from RNA-seq data in the chicken model

The sequence of the chicken genome, like several other draft genome sequences, is presently not fully covered. Gaps, contigs assigned with low confidence and uncharacterized chromosomes result in gene fragmentation and imprecise gene annotation. Transcript abundance estimation from RNA sequencing (R...

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Bibliographic Details
Main Authors: Mickael Orgeur, Marvin Martens, Stefan T. Börno, Bernd Timmermann, Delphine Duprez, Sigmar Stricker
Format: Article
Language:English
Published: The Company of Biologists 2018-01-01
Series:Biology Open
Subjects:
Chicken genome annotation
Gallus gallus
Gene prediction
Genome-guided transcript discovery
RNA sequencing
Transcriptome reconstruction
Online Access:http://bio.biologists.org/content/7/1/bio028498

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