Universal nanohydrophobicity predictions using virtual nanoparticle library

Abstract To facilitate the development of new nanomaterials, especially nanomedicines, a novel computational approach was developed to precisely predict the hydrophobicity of gold nanoparticles (GNPs). The core of this study was to develop a large virtual gold nanoparticle (vGNP) library with comput...

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Main Authors: Wenyi Wang, Xiliang Yan, Linlin Zhao, Daniel P. Russo, Shenqing Wang, Yin Liu, Alexander Sedykh, Xiaoli Zhao, Bing Yan, Hao Zhu
Format: Article
Language:English
Published: BMC 2019-01-01
Series:Journal of Cheminformatics
Subjects:
Online Access:http://link.springer.com/article/10.1186/s13321-019-0329-8
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spelling doaj-037788bcc5bc4cc395558efaeb0b618d2020-11-25T01:29:16ZengBMCJournal of Cheminformatics1758-29462019-01-011111510.1186/s13321-019-0329-8Universal nanohydrophobicity predictions using virtual nanoparticle libraryWenyi Wang0Xiliang Yan1Linlin Zhao2Daniel P. Russo3Shenqing Wang4Yin Liu5Alexander Sedykh6Xiaoli Zhao7Bing Yan8Hao Zhu9The Rutgers Center for Computational and Integrative BiologyThe Rutgers Center for Computational and Integrative BiologyThe Rutgers Center for Computational and Integrative BiologyThe Rutgers Center for Computational and Integrative BiologySchool of Chemistry and Chemical Engineering, Shandong UniversityResearch Center for Eco-Environmental Science, Chinese Academy of SciencesThe Rutgers Center for Computational and Integrative BiologyDepartment of Physiological Sciences, Eastern Virginia Medical SchoolSchool of Chemistry and Chemical Engineering, Shandong UniversityThe Rutgers Center for Computational and Integrative BiologyAbstract To facilitate the development of new nanomaterials, especially nanomedicines, a novel computational approach was developed to precisely predict the hydrophobicity of gold nanoparticles (GNPs). The core of this study was to develop a large virtual gold nanoparticle (vGNP) library with computational nanostructure simulations. Based on the vGNP library, a nanohydrophobicity model was developed and then validated against externally synthesized and tested GNPs. This approach and resulted model is an efficient and effective universal tool to visualize and predict critical physicochemical properties of new nanomaterials before synthesis, guiding nanomaterial design.http://link.springer.com/article/10.1186/s13321-019-0329-8NanohydrohobicitySurface chemistrySurface simulationsNanomaterials designVirtual nanoparticle libraryPredictive model
collection DOAJ
language English
format Article
sources DOAJ
author Wenyi Wang
Xiliang Yan
Linlin Zhao
Daniel P. Russo
Shenqing Wang
Yin Liu
Alexander Sedykh
Xiaoli Zhao
Bing Yan
Hao Zhu
spellingShingle Wenyi Wang
Xiliang Yan
Linlin Zhao
Daniel P. Russo
Shenqing Wang
Yin Liu
Alexander Sedykh
Xiaoli Zhao
Bing Yan
Hao Zhu
Universal nanohydrophobicity predictions using virtual nanoparticle library
Journal of Cheminformatics
Nanohydrohobicity
Surface chemistry
Surface simulations
Nanomaterials design
Virtual nanoparticle library
Predictive model
author_facet Wenyi Wang
Xiliang Yan
Linlin Zhao
Daniel P. Russo
Shenqing Wang
Yin Liu
Alexander Sedykh
Xiaoli Zhao
Bing Yan
Hao Zhu
author_sort Wenyi Wang
title Universal nanohydrophobicity predictions using virtual nanoparticle library
title_short Universal nanohydrophobicity predictions using virtual nanoparticle library
title_full Universal nanohydrophobicity predictions using virtual nanoparticle library
title_fullStr Universal nanohydrophobicity predictions using virtual nanoparticle library
title_full_unstemmed Universal nanohydrophobicity predictions using virtual nanoparticle library
title_sort universal nanohydrophobicity predictions using virtual nanoparticle library
publisher BMC
series Journal of Cheminformatics
issn 1758-2946
publishDate 2019-01-01
description Abstract To facilitate the development of new nanomaterials, especially nanomedicines, a novel computational approach was developed to precisely predict the hydrophobicity of gold nanoparticles (GNPs). The core of this study was to develop a large virtual gold nanoparticle (vGNP) library with computational nanostructure simulations. Based on the vGNP library, a nanohydrophobicity model was developed and then validated against externally synthesized and tested GNPs. This approach and resulted model is an efficient and effective universal tool to visualize and predict critical physicochemical properties of new nanomaterials before synthesis, guiding nanomaterial design.
topic Nanohydrohobicity
Surface chemistry
Surface simulations
Nanomaterials design
Virtual nanoparticle library
Predictive model
url http://link.springer.com/article/10.1186/s13321-019-0329-8
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