Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans
Cercospora kikuchii (Tak. Matsumoto & Tomoy.) M.W. Gardner 1927 is an ascomycete fungal pathogen that causes Cercospora leaf blight and purple seed stain on soybean. Here, we report the first draft genome sequence and assembly of this pathogen. The C. kikuchii strain ARG_18_001 was isolated from...
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doaj-0375c43ece994250a8edb889b8ea5f3d2020-11-25T01:48:41ZengElsevierData in Brief2352-34092019-12-0127Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeansFrancisco J. Sautua0Sergio A. Gonzalez1Vinson P. Doyle2Marcelo F. Berretta3Manuela Gordó4Mercedes M. Scandiani5Maximo L. Rivarola6Paula Fernandez7Marcelo A. Carmona8Universidad de Buenos Aires, Facultad de Agronomía, Cátedra de Fitopatología, Buenos Aires, ArgentinaInstituto de Biotecnología, IABIMO, CICVyA, Instituto Nacional de Tecnología Agropecuaria, Hurlingham, Buenos Aires, ArgentinaDepartment of Plant Pathology and Crop Physiology, LSU AgCenter, Baton Rouge, LA, 70803, USAConsejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina; Instituto de Microbiología y Zoología Agrícola (IMyZA), Centro de Investigaciones en Ciencias Veterinarias y Agronómicas (CICVyA), Instituto Nacional de Tecnología Agropecuaria (INTA), Buenos Aires, ArgentinaLaboratorio Agrícola Río Paraná, San Pedro, ArgentinaUniversidad Nacional de Rosario, Facultad de Ciencias Bioquímicas y Farmacéuticas, Centro de Referencia de Micología (CEREMIC), Rosario, ArgentinaInstituto de Biotecnología, IABIMO, CICVyA, Instituto Nacional de Tecnología Agropecuaria, Hurlingham, Buenos Aires, Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, ArgentinaInstituto de Biotecnología, IABIMO, CICVyA, Instituto Nacional de Tecnología Agropecuaria, Hurlingham, Buenos Aires, Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina; Universidad Nacional de San Martín, Instituto de Investigaciones Biotecnológicas, ArgentinaUniversidad de Buenos Aires, Facultad de Agronomía, Cátedra de Fitopatología, Buenos Aires, Argentina; Corresponding author.Cercospora kikuchii (Tak. Matsumoto & Tomoy.) M.W. Gardner 1927 is an ascomycete fungal pathogen that causes Cercospora leaf blight and purple seed stain on soybean. Here, we report the first draft genome sequence and assembly of this pathogen. The C. kikuchii strain ARG_18_001 was isolated from soybean purple seed collected from San Pedro, Buenos Aires, Argentina, during the 2018 harvest. The genome was sequenced using a 2 × 150 bp paired-end method by Illumina NovaSeq 6000. The C. kikuchii protein-coding genes were predicted using FunGAP (Fungal Genome Annotation Pipeline). The draft genome assembly was 33.1 Mb in size with a GC-content of 53%. The gene prediction resulted in 14,856 gene models/14,721 protein coding genes. Genomic data of C. kikuchii presented here will be a useful resource for future studies of this pathosystem. The data can be accessed at GenBank under the accession number VTAY00000000 https://www.ncbi.nlm.nih.gov/nuccore/VTAY00000000. Keywords: Cercospora kikuchii, Draft genome, Next generation sequencing (NGS), Cercospora leaf blight (CLB), Purple seed stain (PSS), Agriculture, Bioinformatics, Fungal pathogenshttp://www.sciencedirect.com/science/article/pii/S2352340919310480 |
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DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Francisco J. Sautua Sergio A. Gonzalez Vinson P. Doyle Marcelo F. Berretta Manuela Gordó Mercedes M. Scandiani Maximo L. Rivarola Paula Fernandez Marcelo A. Carmona |
spellingShingle |
Francisco J. Sautua Sergio A. Gonzalez Vinson P. Doyle Marcelo F. Berretta Manuela Gordó Mercedes M. Scandiani Maximo L. Rivarola Paula Fernandez Marcelo A. Carmona Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans Data in Brief |
author_facet |
Francisco J. Sautua Sergio A. Gonzalez Vinson P. Doyle Marcelo F. Berretta Manuela Gordó Mercedes M. Scandiani Maximo L. Rivarola Paula Fernandez Marcelo A. Carmona |
author_sort |
Francisco J. Sautua |
title |
Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans |
title_short |
Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans |
title_full |
Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans |
title_fullStr |
Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans |
title_full_unstemmed |
Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans |
title_sort |
draft genome sequence data of cercospora kikuchii, a causal agent of cercospora leaf blight and purple seed stain of soybeans |
publisher |
Elsevier |
series |
Data in Brief |
issn |
2352-3409 |
publishDate |
2019-12-01 |
description |
Cercospora kikuchii (Tak. Matsumoto & Tomoy.) M.W. Gardner 1927 is an ascomycete fungal pathogen that causes Cercospora leaf blight and purple seed stain on soybean. Here, we report the first draft genome sequence and assembly of this pathogen. The C. kikuchii strain ARG_18_001 was isolated from soybean purple seed collected from San Pedro, Buenos Aires, Argentina, during the 2018 harvest. The genome was sequenced using a 2 × 150 bp paired-end method by Illumina NovaSeq 6000. The C. kikuchii protein-coding genes were predicted using FunGAP (Fungal Genome Annotation Pipeline). The draft genome assembly was 33.1 Mb in size with a GC-content of 53%. The gene prediction resulted in 14,856 gene models/14,721 protein coding genes. Genomic data of C. kikuchii presented here will be a useful resource for future studies of this pathosystem. The data can be accessed at GenBank under the accession number VTAY00000000 https://www.ncbi.nlm.nih.gov/nuccore/VTAY00000000. Keywords: Cercospora kikuchii, Draft genome, Next generation sequencing (NGS), Cercospora leaf blight (CLB), Purple seed stain (PSS), Agriculture, Bioinformatics, Fungal pathogens |
url |
http://www.sciencedirect.com/science/article/pii/S2352340919310480 |
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