Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans

Cercospora kikuchii (Tak. Matsumoto & Tomoy.) M.W. Gardner 1927 is an ascomycete fungal pathogen that causes Cercospora leaf blight and purple seed stain on soybean. Here, we report the first draft genome sequence and assembly of this pathogen. The C. kikuchii strain ARG_18_001 was isolated from...

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Main Authors: Francisco J. Sautua, Sergio A. Gonzalez, Vinson P. Doyle, Marcelo F. Berretta, Manuela Gordó, Mercedes M. Scandiani, Maximo L. Rivarola, Paula Fernandez, Marcelo A. Carmona
Format: Article
Language:English
Published: Elsevier 2019-12-01
Series:Data in Brief
Online Access:http://www.sciencedirect.com/science/article/pii/S2352340919310480
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spelling doaj-0375c43ece994250a8edb889b8ea5f3d2020-11-25T01:48:41ZengElsevierData in Brief2352-34092019-12-0127Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeansFrancisco J. Sautua0Sergio A. Gonzalez1Vinson P. Doyle2Marcelo F. Berretta3Manuela Gordó4Mercedes M. Scandiani5Maximo L. Rivarola6Paula Fernandez7Marcelo A. Carmona8Universidad de Buenos Aires, Facultad de Agronomía, Cátedra de Fitopatología, Buenos Aires, ArgentinaInstituto de Biotecnología, IABIMO, CICVyA, Instituto Nacional de Tecnología Agropecuaria, Hurlingham, Buenos Aires, ArgentinaDepartment of Plant Pathology and Crop Physiology, LSU AgCenter, Baton Rouge, LA, 70803, USAConsejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina; Instituto de Microbiología y Zoología Agrícola (IMyZA), Centro de Investigaciones en Ciencias Veterinarias y Agronómicas (CICVyA), Instituto Nacional de Tecnología Agropecuaria (INTA), Buenos Aires, ArgentinaLaboratorio Agrícola Río Paraná, San Pedro, ArgentinaUniversidad Nacional de Rosario, Facultad de Ciencias Bioquímicas y Farmacéuticas, Centro de Referencia de Micología (CEREMIC), Rosario, ArgentinaInstituto de Biotecnología, IABIMO, CICVyA, Instituto Nacional de Tecnología Agropecuaria, Hurlingham, Buenos Aires, Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, ArgentinaInstituto de Biotecnología, IABIMO, CICVyA, Instituto Nacional de Tecnología Agropecuaria, Hurlingham, Buenos Aires, Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina; Universidad Nacional de San Martín, Instituto de Investigaciones Biotecnológicas, ArgentinaUniversidad de Buenos Aires, Facultad de Agronomía, Cátedra de Fitopatología, Buenos Aires, Argentina; Corresponding author.Cercospora kikuchii (Tak. Matsumoto & Tomoy.) M.W. Gardner 1927 is an ascomycete fungal pathogen that causes Cercospora leaf blight and purple seed stain on soybean. Here, we report the first draft genome sequence and assembly of this pathogen. The C. kikuchii strain ARG_18_001 was isolated from soybean purple seed collected from San Pedro, Buenos Aires, Argentina, during the 2018 harvest. The genome was sequenced using a 2 × 150 bp paired-end method by Illumina NovaSeq 6000. The C. kikuchii protein-coding genes were predicted using FunGAP (Fungal Genome Annotation Pipeline). The draft genome assembly was 33.1 Mb in size with a GC-content of 53%. The gene prediction resulted in 14,856 gene models/14,721 protein coding genes. Genomic data of C. kikuchii presented here will be a useful resource for future studies of this pathosystem. The data can be accessed at GenBank under the accession number VTAY00000000 https://www.ncbi.nlm.nih.gov/nuccore/VTAY00000000. Keywords: Cercospora kikuchii, Draft genome, Next generation sequencing (NGS), Cercospora leaf blight (CLB), Purple seed stain (PSS), Agriculture, Bioinformatics, Fungal pathogenshttp://www.sciencedirect.com/science/article/pii/S2352340919310480
collection DOAJ
language English
format Article
sources DOAJ
author Francisco J. Sautua
Sergio A. Gonzalez
Vinson P. Doyle
Marcelo F. Berretta
Manuela Gordó
Mercedes M. Scandiani
Maximo L. Rivarola
Paula Fernandez
Marcelo A. Carmona
spellingShingle Francisco J. Sautua
Sergio A. Gonzalez
Vinson P. Doyle
Marcelo F. Berretta
Manuela Gordó
Mercedes M. Scandiani
Maximo L. Rivarola
Paula Fernandez
Marcelo A. Carmona
Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans
Data in Brief
author_facet Francisco J. Sautua
Sergio A. Gonzalez
Vinson P. Doyle
Marcelo F. Berretta
Manuela Gordó
Mercedes M. Scandiani
Maximo L. Rivarola
Paula Fernandez
Marcelo A. Carmona
author_sort Francisco J. Sautua
title Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans
title_short Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans
title_full Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans
title_fullStr Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans
title_full_unstemmed Draft genome sequence data of Cercospora kikuchii, a causal agent of Cercospora leaf blight and purple seed stain of soybeans
title_sort draft genome sequence data of cercospora kikuchii, a causal agent of cercospora leaf blight and purple seed stain of soybeans
publisher Elsevier
series Data in Brief
issn 2352-3409
publishDate 2019-12-01
description Cercospora kikuchii (Tak. Matsumoto & Tomoy.) M.W. Gardner 1927 is an ascomycete fungal pathogen that causes Cercospora leaf blight and purple seed stain on soybean. Here, we report the first draft genome sequence and assembly of this pathogen. The C. kikuchii strain ARG_18_001 was isolated from soybean purple seed collected from San Pedro, Buenos Aires, Argentina, during the 2018 harvest. The genome was sequenced using a 2 × 150 bp paired-end method by Illumina NovaSeq 6000. The C. kikuchii protein-coding genes were predicted using FunGAP (Fungal Genome Annotation Pipeline). The draft genome assembly was 33.1 Mb in size with a GC-content of 53%. The gene prediction resulted in 14,856 gene models/14,721 protein coding genes. Genomic data of C. kikuchii presented here will be a useful resource for future studies of this pathosystem. The data can be accessed at GenBank under the accession number VTAY00000000 https://www.ncbi.nlm.nih.gov/nuccore/VTAY00000000. Keywords: Cercospora kikuchii, Draft genome, Next generation sequencing (NGS), Cercospora leaf blight (CLB), Purple seed stain (PSS), Agriculture, Bioinformatics, Fungal pathogens
url http://www.sciencedirect.com/science/article/pii/S2352340919310480
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