Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks.
We analyzed protein expression data for Lupus patients, which have been obtained from publicly available databases. A combination of systems biology and statistical thermodynamics approaches was used to extract topological properties of the associated protein-protein interaction networks for each of...
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doaj-0274190597874c13857de6bb4f6c18322021-03-03T21:33:03ZengPublic Library of Science (PLoS)PLoS ONE1932-62032020-01-01153e022688310.1371/journal.pone.0226883Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks.Elizabeth J BrantEdward A RietmanGiannoula Lakka KlementMarco CavagliaJack A TuszynskiWe analyzed protein expression data for Lupus patients, which have been obtained from publicly available databases. A combination of systems biology and statistical thermodynamics approaches was used to extract topological properties of the associated protein-protein interaction networks for each of the 291 patients whose samples were used to provide the molecular data. We have concluded that among the many proteins that appear to play critical roles in this pathology, most of them are either ribosomal proteins, ubiquitination pathway proteins or heat shock proteins. We propose some of the proteins identified in this study to be considered for drug targeting.https://doi.org/10.1371/journal.pone.0226883 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Elizabeth J Brant Edward A Rietman Giannoula Lakka Klement Marco Cavaglia Jack A Tuszynski |
spellingShingle |
Elizabeth J Brant Edward A Rietman Giannoula Lakka Klement Marco Cavaglia Jack A Tuszynski Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks. PLoS ONE |
author_facet |
Elizabeth J Brant Edward A Rietman Giannoula Lakka Klement Marco Cavaglia Jack A Tuszynski |
author_sort |
Elizabeth J Brant |
title |
Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks. |
title_short |
Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks. |
title_full |
Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks. |
title_fullStr |
Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks. |
title_full_unstemmed |
Personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks. |
title_sort |
personalized therapy design for systemic lupus erythematosus based on the analysis of protein-protein interaction networks. |
publisher |
Public Library of Science (PLoS) |
series |
PLoS ONE |
issn |
1932-6203 |
publishDate |
2020-01-01 |
description |
We analyzed protein expression data for Lupus patients, which have been obtained from publicly available databases. A combination of systems biology and statistical thermodynamics approaches was used to extract topological properties of the associated protein-protein interaction networks for each of the 291 patients whose samples were used to provide the molecular data. We have concluded that among the many proteins that appear to play critical roles in this pathology, most of them are either ribosomal proteins, ubiquitination pathway proteins or heat shock proteins. We propose some of the proteins identified in this study to be considered for drug targeting. |
url |
https://doi.org/10.1371/journal.pone.0226883 |
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