Estimating abundance with interruptions in data collection using open population spatial capture–recapture models

Abstract The estimation of population size remains one of the primary goals and challenges in ecology and provides a basis for debate and policy in wildlife management. Despite the development of efficient noninvasive sampling methods and robust statistical tools to estimate abundance, the maintenan...

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Main Authors: Cyril Milleret, Pierre Dupont, Joseph Chipperfield, Daniel Turek, Henrik Brøseth, Olivier Gimenez, Perry deValpine, Richard Bischof
Format: Article
Language:English
Published: Wiley 2020-07-01
Series:Ecosphere
Subjects:
Online Access:https://doi.org/10.1002/ecs2.3172
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spelling doaj-01e21cae9bf64b7989d2e0f923fbc3092020-11-25T02:55:53ZengWileyEcosphere2150-89252020-07-01117n/an/a10.1002/ecs2.3172Estimating abundance with interruptions in data collection using open population spatial capture–recapture modelsCyril Milleret0Pierre Dupont1Joseph Chipperfield2Daniel Turek3Henrik Brøseth4Olivier Gimenez5Perry deValpine6Richard Bischof7Faculty of Environmental Sciences and Natural Resource Management Norwegian University of Life Sciences Ås NO‐1432 NorwayFaculty of Environmental Sciences and Natural Resource Management Norwegian University of Life Sciences Ås NO‐1432 NorwayFaculty of Environmental Sciences and Natural Resource Management Norwegian University of Life Sciences Ås NO‐1432 NorwayDepartment of Mathematics & Statistics Williams College Williamstown Massachusetts 01267 USANorwegian Institute for Nature Research Trondheim NO‐7485 NorwayCEFE University of Montpellier CNRS University of Paul Valéry Montpellier 3 EPHE IRD Montpellier FranceDepartment of Environmental Science, Policy & Management University of California Berkeley Berkeley California 94720 USAFaculty of Environmental Sciences and Natural Resource Management Norwegian University of Life Sciences Ås NO‐1432 NorwayAbstract The estimation of population size remains one of the primary goals and challenges in ecology and provides a basis for debate and policy in wildlife management. Despite the development of efficient noninvasive sampling methods and robust statistical tools to estimate abundance, the maintenance of field sampling is still subject to economic and logistic constraints. These can result in intentional or unintentional interruptions in sampling and cause gaps in data time series, posing a challenge to abundance estimation, and ultimately conservation and management decisions. We applied an open population spatial capture–recapture (OPSCR) model to simulations and a real‐life case study to test the reliability of abundance inference to interruptions in data collection. Using individual detections occurring over consecutive sampling occasions, OPSCR models allow the estimation of abundance while accounting for lack of demographic and geographic closure between occasions. First, we simulated sampling data with interruptions in field sampling of different lengths and timing and checked the performance of an OPSCR model in deriving abundance for species with slow and intermediate life‐history strategies. Next, we introduced artificial sampling interruptions of various magnitudes and timing to a five‐year noninvasive monitoring data set of wolverines (Gulo gulo) in Norway and quantified the consequences for OPSCR model predictions. Inferences from OPSCR models were reliable even with temporal interruptions in monitoring. Interruption did not cause systematic bias, but increased uncertainty. Interruptions occurring at occasions near the beginning and the end of the sampling period caused higher uncertainty. The loss in precision was more severe for species with a faster life‐history strategy. OPSCR allows monitoring studies to provide contiguous abundance estimates to managers, stakeholders, and policy makers even when data are noncontiguous. OPSCR models do not only help cope with unintentional interruptions during sampling but also offer opportunities for using intentional sampling interruptions during the design of cost‐effective population surveys.https://doi.org/10.1002/ecs2.3172cost efficiencydensitymonitoringgapspopulation dynamicsWolverine (Gulo gulo)
collection DOAJ
language English
format Article
sources DOAJ
author Cyril Milleret
Pierre Dupont
Joseph Chipperfield
Daniel Turek
Henrik Brøseth
Olivier Gimenez
Perry deValpine
Richard Bischof
spellingShingle Cyril Milleret
Pierre Dupont
Joseph Chipperfield
Daniel Turek
Henrik Brøseth
Olivier Gimenez
Perry deValpine
Richard Bischof
Estimating abundance with interruptions in data collection using open population spatial capture–recapture models
Ecosphere
cost efficiency
density
monitoring
gaps
population dynamics
Wolverine (Gulo gulo)
author_facet Cyril Milleret
Pierre Dupont
Joseph Chipperfield
Daniel Turek
Henrik Brøseth
Olivier Gimenez
Perry deValpine
Richard Bischof
author_sort Cyril Milleret
title Estimating abundance with interruptions in data collection using open population spatial capture–recapture models
title_short Estimating abundance with interruptions in data collection using open population spatial capture–recapture models
title_full Estimating abundance with interruptions in data collection using open population spatial capture–recapture models
title_fullStr Estimating abundance with interruptions in data collection using open population spatial capture–recapture models
title_full_unstemmed Estimating abundance with interruptions in data collection using open population spatial capture–recapture models
title_sort estimating abundance with interruptions in data collection using open population spatial capture–recapture models
publisher Wiley
series Ecosphere
issn 2150-8925
publishDate 2020-07-01
description Abstract The estimation of population size remains one of the primary goals and challenges in ecology and provides a basis for debate and policy in wildlife management. Despite the development of efficient noninvasive sampling methods and robust statistical tools to estimate abundance, the maintenance of field sampling is still subject to economic and logistic constraints. These can result in intentional or unintentional interruptions in sampling and cause gaps in data time series, posing a challenge to abundance estimation, and ultimately conservation and management decisions. We applied an open population spatial capture–recapture (OPSCR) model to simulations and a real‐life case study to test the reliability of abundance inference to interruptions in data collection. Using individual detections occurring over consecutive sampling occasions, OPSCR models allow the estimation of abundance while accounting for lack of demographic and geographic closure between occasions. First, we simulated sampling data with interruptions in field sampling of different lengths and timing and checked the performance of an OPSCR model in deriving abundance for species with slow and intermediate life‐history strategies. Next, we introduced artificial sampling interruptions of various magnitudes and timing to a five‐year noninvasive monitoring data set of wolverines (Gulo gulo) in Norway and quantified the consequences for OPSCR model predictions. Inferences from OPSCR models were reliable even with temporal interruptions in monitoring. Interruption did not cause systematic bias, but increased uncertainty. Interruptions occurring at occasions near the beginning and the end of the sampling period caused higher uncertainty. The loss in precision was more severe for species with a faster life‐history strategy. OPSCR allows monitoring studies to provide contiguous abundance estimates to managers, stakeholders, and policy makers even when data are noncontiguous. OPSCR models do not only help cope with unintentional interruptions during sampling but also offer opportunities for using intentional sampling interruptions during the design of cost‐effective population surveys.
topic cost efficiency
density
monitoring
gaps
population dynamics
Wolverine (Gulo gulo)
url https://doi.org/10.1002/ecs2.3172
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