Gateway-compatible vectors for functional analysis of proteins in cell type specific manner

Abstract Background Genetically encoded fluorescent proteins are often used to label proteins and study protein function and localization in vivo. Traditional cloning methods mediated by restriction digestion and ligation are time-consuming and sometimes difficult due to the lack of suitable restric...

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Main Authors: Liu Zhang, Yang Zhao, Haiyan Liang, Xugang Li, Kimberly L. Gallagher, Shuang Wu
Format: Article
Language:English
Published: BMC 2020-07-01
Series:Plant Methods
Subjects:
Online Access:http://link.springer.com/article/10.1186/s13007-020-00635-z
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spelling doaj-01660badc7b743babe67d01c05876e422020-11-25T02:14:14ZengBMCPlant Methods1746-48112020-07-0116111010.1186/s13007-020-00635-zGateway-compatible vectors for functional analysis of proteins in cell type specific mannerLiu Zhang0Yang Zhao1Haiyan Liang2Xugang Li3Kimberly L. Gallagher4Shuang Wu5College of Life Sciences, FAFU-UCR Joint Center and Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry UniversityCollege of Life Sciences, FAFU-UCR Joint Center and Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry UniversityCollege of Resource and Environment, Fujian Agriculture and Forestry UniversityState Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural UniversityUniversity of PennsylvaniaCollege of Life Sciences, FAFU-UCR Joint Center and Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry UniversityAbstract Background Genetically encoded fluorescent proteins are often used to label proteins and study protein function and localization in vivo. Traditional cloning methods mediated by restriction digestion and ligation are time-consuming and sometimes difficult due to the lack of suitable restriction sites. Invitrogen developed the Gateway cloning system based on the site-specific DNA recombination, which allows for digestion-free cloning. Most gateway destination vectors available for use in plants employ either the 35S or ubiquitin promoters, which confer high-level, ubiquitous expression. There are far fewer options for moderate, cell-type specific expression. Results Here we report on the construction of a Gateway-compatible cloning system (SWU vectors) to rapidly tag various proteins and express them in a cell-type specific manner in plants. We tested the SWU vectors using the HISTONE (H2B) coding sequence in stable transgenic plants. Conclusions The SWU vectors are a valuable tool for low cost, high efficiency functional analysis of proteins of interest in specific cell types in the Arabidopsis root.http://link.springer.com/article/10.1186/s13007-020-00635-zFluorescent proteinsPhotoconversionGateway vectorsCell-specific expressionArabidopsis
collection DOAJ
language English
format Article
sources DOAJ
author Liu Zhang
Yang Zhao
Haiyan Liang
Xugang Li
Kimberly L. Gallagher
Shuang Wu
spellingShingle Liu Zhang
Yang Zhao
Haiyan Liang
Xugang Li
Kimberly L. Gallagher
Shuang Wu
Gateway-compatible vectors for functional analysis of proteins in cell type specific manner
Plant Methods
Fluorescent proteins
Photoconversion
Gateway vectors
Cell-specific expression
Arabidopsis
author_facet Liu Zhang
Yang Zhao
Haiyan Liang
Xugang Li
Kimberly L. Gallagher
Shuang Wu
author_sort Liu Zhang
title Gateway-compatible vectors for functional analysis of proteins in cell type specific manner
title_short Gateway-compatible vectors for functional analysis of proteins in cell type specific manner
title_full Gateway-compatible vectors for functional analysis of proteins in cell type specific manner
title_fullStr Gateway-compatible vectors for functional analysis of proteins in cell type specific manner
title_full_unstemmed Gateway-compatible vectors for functional analysis of proteins in cell type specific manner
title_sort gateway-compatible vectors for functional analysis of proteins in cell type specific manner
publisher BMC
series Plant Methods
issn 1746-4811
publishDate 2020-07-01
description Abstract Background Genetically encoded fluorescent proteins are often used to label proteins and study protein function and localization in vivo. Traditional cloning methods mediated by restriction digestion and ligation are time-consuming and sometimes difficult due to the lack of suitable restriction sites. Invitrogen developed the Gateway cloning system based on the site-specific DNA recombination, which allows for digestion-free cloning. Most gateway destination vectors available for use in plants employ either the 35S or ubiquitin promoters, which confer high-level, ubiquitous expression. There are far fewer options for moderate, cell-type specific expression. Results Here we report on the construction of a Gateway-compatible cloning system (SWU vectors) to rapidly tag various proteins and express them in a cell-type specific manner in plants. We tested the SWU vectors using the HISTONE (H2B) coding sequence in stable transgenic plants. Conclusions The SWU vectors are a valuable tool for low cost, high efficiency functional analysis of proteins of interest in specific cell types in the Arabidopsis root.
topic Fluorescent proteins
Photoconversion
Gateway vectors
Cell-specific expression
Arabidopsis
url http://link.springer.com/article/10.1186/s13007-020-00635-z
work_keys_str_mv AT liuzhang gatewaycompatiblevectorsforfunctionalanalysisofproteinsincelltypespecificmanner
AT yangzhao gatewaycompatiblevectorsforfunctionalanalysisofproteinsincelltypespecificmanner
AT haiyanliang gatewaycompatiblevectorsforfunctionalanalysisofproteinsincelltypespecificmanner
AT xugangli gatewaycompatiblevectorsforfunctionalanalysisofproteinsincelltypespecificmanner
AT kimberlylgallagher gatewaycompatiblevectorsforfunctionalanalysisofproteinsincelltypespecificmanner
AT shuangwu gatewaycompatiblevectorsforfunctionalanalysisofproteinsincelltypespecificmanner
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