Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts

The thermotherapy of sugarcane setts is currently the primary management method for Leifsonia xyli subsp. xyli (Lxx), in Brazil. When they are immersed, the enzymes and proteins of the bacterial cell are denatured without harming the setts buds. Due to possible escapes from detection and consequent...

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Main Authors: Vanessa Duarte Dias, Renato Carrer Filho, Marcos Gomes da Cunha
Format: Article
Language:English
Published: Universidade Federal de Goiás 2019-09-01
Series:Pesquisa Agropecuária Tropical
Subjects:
Online Access:https://www.revistas.ufg.br/pat/article/view/55132
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spelling doaj-014f787bfb15498fa67700a1402ad7b62020-11-25T01:56:06ZengUniversidade Federal de Goiás Pesquisa Agropecuária Tropical1983-40632019-09-014910.1590/1983-40632019v4955132Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane settsVanessa Duarte Dias0Renato Carrer Filho1Marcos Gomes da Cunha2Universidade Federal de Goiás, Escola de Agronomia, Goiânia, GO, Brasil.Universidade Federal de Goiás, Escola de Agronomia, Goiânia, GO, Brasil.Universidade Federal de Goiás, Escola de Agronomia, Goiânia, GO, Brasil.The thermotherapy of sugarcane setts is currently the primary management method for Leifsonia xyli subsp. xyli (Lxx), in Brazil. When they are immersed, the enzymes and proteins of the bacterial cell are denatured without harming the setts buds. Due to possible escapes from detection and consequent bacterium survival to thermotherapy, what may result in asymptomatic seedlings, this study aimed to detect the Leifsonia xyli subsp. xyli bacterium in sugarcane setts using molecular techniques and different time and temperature combinations, with or without the addition of antibiotics. The conventional PCR method detected the Lxx bacterial DNA only in the positive control, consisting of a highly susceptible plant with a high bacterial concentration. Using the nested-PCR, the Lxx DNA was detected in all the treatments used. Thus, none of the treatments adopted in the thermotherapy was able to eliminate the Lxx from the setts, and the use of kasugamicin also did not eliminate the bacterium, but reduced the bacterial population in the tested treatments. These results confirm that the nested-PCR is a useful tool to detect the presence of this phytobacterium in setts that will be used as seedlings.https://www.revistas.ufg.br/pat/article/view/55132heat treatmentratoon stunting diseasepolimerase chain reaction
collection DOAJ
language English
format Article
sources DOAJ
author Vanessa Duarte Dias
Renato Carrer Filho
Marcos Gomes da Cunha
spellingShingle Vanessa Duarte Dias
Renato Carrer Filho
Marcos Gomes da Cunha
Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts
Pesquisa Agropecuária Tropical
heat treatment
ratoon stunting disease
polimerase chain reaction
author_facet Vanessa Duarte Dias
Renato Carrer Filho
Marcos Gomes da Cunha
author_sort Vanessa Duarte Dias
title Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts
title_short Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts
title_full Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts
title_fullStr Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts
title_full_unstemmed Comparison of Leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts
title_sort comparison of leifsonia xyli subsp. xyli molecular detection in heat-treated sugarcane setts
publisher Universidade Federal de Goiás
series Pesquisa Agropecuária Tropical
issn 1983-4063
publishDate 2019-09-01
description The thermotherapy of sugarcane setts is currently the primary management method for Leifsonia xyli subsp. xyli (Lxx), in Brazil. When they are immersed, the enzymes and proteins of the bacterial cell are denatured without harming the setts buds. Due to possible escapes from detection and consequent bacterium survival to thermotherapy, what may result in asymptomatic seedlings, this study aimed to detect the Leifsonia xyli subsp. xyli bacterium in sugarcane setts using molecular techniques and different time and temperature combinations, with or without the addition of antibiotics. The conventional PCR method detected the Lxx bacterial DNA only in the positive control, consisting of a highly susceptible plant with a high bacterial concentration. Using the nested-PCR, the Lxx DNA was detected in all the treatments used. Thus, none of the treatments adopted in the thermotherapy was able to eliminate the Lxx from the setts, and the use of kasugamicin also did not eliminate the bacterium, but reduced the bacterial population in the tested treatments. These results confirm that the nested-PCR is a useful tool to detect the presence of this phytobacterium in setts that will be used as seedlings.
topic heat treatment
ratoon stunting disease
polimerase chain reaction
url https://www.revistas.ufg.br/pat/article/view/55132
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