An Evaluation of the Genetic Structure of Geese Maintained in Poland on the Basis of Microsatellite Markers

The aim of this study was to evaluate the genetic variability of the White Kołuda<sup>&#174;</sup> goose and 12 conservative flocks: Kielecka, Podkarpacka, Garbonosa, Pomerian, Rypinska, Landes, Lubelska, Suwalska, Kartuska, Romanska, Slowacka, and Kubanska, maintained in Poland usin...

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Main Authors: Joanna Warzecha, Maria Oczkowicz, Dominika Rubis, Agnieszka Fornal, Tomasz Szmatoła, Monika Bugno-Poniewierska
Format: Article
Language:English
Published: MDPI AG 2019-09-01
Series:Animals
Subjects:
Online Access:https://www.mdpi.com/2076-2615/9/10/737
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spelling doaj-005c1ca730324ec287703126a73d98ad2020-11-25T02:03:11ZengMDPI AGAnimals2076-26152019-09-0191073710.3390/ani9100737ani9100737An Evaluation of the Genetic Structure of Geese Maintained in Poland on the Basis of Microsatellite MarkersJoanna Warzecha0Maria Oczkowicz1Dominika Rubis2Agnieszka Fornal3Tomasz Szmatoła4Monika Bugno-Poniewierska5Department of Molecular Biology of Animals National Research, Institute of Animal Production, 32-083 Kraków, PolandDepartment of Molecular Biology of Animals National Research, Institute of Animal Production, 32-083 Kraków, PolandDepartment of Molecular Biology of Animals National Research, Institute of Animal Production, 32-083 Kraków, PolandDepartment of Molecular Biology of Animals National Research, Institute of Animal Production, 32-083 Kraków, PolandCentre of Veterinary Medicine, University of Agriculture in Kraków, 30-059 Kraków, PolandFaculty of Animal Breeding and Biology Agricultural University in Cracow, 31-120 Kraków, PolandThe aim of this study was to evaluate the genetic variability of the White Kołuda<sup>&#174;</sup> goose and 12 conservative flocks: Kielecka, Podkarpacka, Garbonosa, Pomerian, Rypinska, Landes, Lubelska, Suwalska, Kartuska, Romanska, Slowacka, and Kubanska, maintained in Poland using microsatellite data. The genetic diversity of geese kept in Poland remains poorly analyzed at the molecular level. In total 392 samples were examined with the usage of 15 microsatellite markers. 119 alleles were identified and the number of alleles per locus ranged from 1 to 13. The highest number of alleles was observed in TTUCG5 (16) and the lowest in CAUD-G007 (2), while CKW47 was monomorphic. The lowest value of expected heterozygosity (H<sub>e</sub>) was observed in Landes, while the highest in Romanska. Similarly, the observed heterozygosity (H<sub>o</sub>) was the lowest in Landes but the highest in Kartuska. The polymorphism information content (PIC) indicates loci TTUCG5 as the most valuable microsatellite marker among those examined. The Structure software was used for the first time to identify goose populations, revealing high admixture between breeds and their close genetic propinquity. Moreover, the presented panel of microsatellite markers remained polymorphic and is useful for population studies of geese and assessment of genetic diversity.https://www.mdpi.com/2076-2615/9/10/737gooseconservative flocksmicrosatellite markersgenetic diversitystructure analysis
collection DOAJ
language English
format Article
sources DOAJ
author Joanna Warzecha
Maria Oczkowicz
Dominika Rubis
Agnieszka Fornal
Tomasz Szmatoła
Monika Bugno-Poniewierska
spellingShingle Joanna Warzecha
Maria Oczkowicz
Dominika Rubis
Agnieszka Fornal
Tomasz Szmatoła
Monika Bugno-Poniewierska
An Evaluation of the Genetic Structure of Geese Maintained in Poland on the Basis of Microsatellite Markers
Animals
goose
conservative flocks
microsatellite markers
genetic diversity
structure analysis
author_facet Joanna Warzecha
Maria Oczkowicz
Dominika Rubis
Agnieszka Fornal
Tomasz Szmatoła
Monika Bugno-Poniewierska
author_sort Joanna Warzecha
title An Evaluation of the Genetic Structure of Geese Maintained in Poland on the Basis of Microsatellite Markers
title_short An Evaluation of the Genetic Structure of Geese Maintained in Poland on the Basis of Microsatellite Markers
title_full An Evaluation of the Genetic Structure of Geese Maintained in Poland on the Basis of Microsatellite Markers
title_fullStr An Evaluation of the Genetic Structure of Geese Maintained in Poland on the Basis of Microsatellite Markers
title_full_unstemmed An Evaluation of the Genetic Structure of Geese Maintained in Poland on the Basis of Microsatellite Markers
title_sort evaluation of the genetic structure of geese maintained in poland on the basis of microsatellite markers
publisher MDPI AG
series Animals
issn 2076-2615
publishDate 2019-09-01
description The aim of this study was to evaluate the genetic variability of the White Kołuda<sup>&#174;</sup> goose and 12 conservative flocks: Kielecka, Podkarpacka, Garbonosa, Pomerian, Rypinska, Landes, Lubelska, Suwalska, Kartuska, Romanska, Slowacka, and Kubanska, maintained in Poland using microsatellite data. The genetic diversity of geese kept in Poland remains poorly analyzed at the molecular level. In total 392 samples were examined with the usage of 15 microsatellite markers. 119 alleles were identified and the number of alleles per locus ranged from 1 to 13. The highest number of alleles was observed in TTUCG5 (16) and the lowest in CAUD-G007 (2), while CKW47 was monomorphic. The lowest value of expected heterozygosity (H<sub>e</sub>) was observed in Landes, while the highest in Romanska. Similarly, the observed heterozygosity (H<sub>o</sub>) was the lowest in Landes but the highest in Kartuska. The polymorphism information content (PIC) indicates loci TTUCG5 as the most valuable microsatellite marker among those examined. The Structure software was used for the first time to identify goose populations, revealing high admixture between breeds and their close genetic propinquity. Moreover, the presented panel of microsatellite markers remained polymorphic and is useful for population studies of geese and assessment of genetic diversity.
topic goose
conservative flocks
microsatellite markers
genetic diversity
structure analysis
url https://www.mdpi.com/2076-2615/9/10/737
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