Auto-encoding NMR chemical shifts from their native vector space to a residue-level biophysical index

by Gabriele Orlando, Daniele Raimondi, Wim F. Vranken
Published 2019-06-01

An Evolutionary View on Disulfide Bond Connectivities Prediction Using Phylogenetic Trees and a Simple Cysteine Mutation Model.

by Daniele Raimondi, Gabriele Orlando, Wim F Vranken
Published 2015-01-01

Exploring the Sequence-based Prediction of Folding Initiation Sites in Proteins

by Daniele Raimondi, Gabriele Orlando, Rita Pancsa, Taushif Khan, Wim F. Vranken
Published 2017-08-01

Online biophysical predictions for SARS-CoV-2 proteins

by Luciano Kagami, Joel Roca-Martínez, Jose Gavaldá-García, Pathmanaban Ramasamy, K. Anton Feenstra, Wim F. Vranken
Published 2021-04-01

An intrinsically disordered proteins community for ELIXIR [version 1; peer review: 2 approved]

by Norman E. Davey, M. Madan Babu, Martin Blackledge, Alan Bridge, Salvador Capella-Gutierrez, Zsuzsanna Dosztanyi, Rachel Drysdale, Richard J. Edwards, Arne Elofsson, Isabella C. Felli, Toby J. Gibson, Aleksandras Gutmanas, John M. Hancock, Jen Harrow, Desmond Higgins, Cy M. Jeffries, Philippe Le Mercier, Balint Mészáros, Marco Necci, Cedric Notredame, Sandra Orchard, Christos A. Ouzounis, Rita Pancsa, Elena Papaleo, Roberta Pierattelli, Damiano Piovesan, Vasilis J. Promponas, Patrick Ruch, Gabriella Rustici, Pedro Romero, Sirarat Sarntivijai, Gary Saunders, Benjamin Schuler, Malvika Sharan, Denis C. Shields, Joel L. Sussman, Jonathan A. Tedds, Peter Tompa, Michael Turewicz, Jiri Vondrasek, Wim F. Vranken, Bonnie Ann Wallace, Kanin Wichapong, Silvio C. E. Tosatto
Published 2019-10-01