Need for Laboratory Ecosystems To Unravel the Structures and Functions of Soil Microbial Communities Mediated by Chemistry

by Kateryna Zhalnina, Karsten Zengler, Dianne Newman, Trent R. Northen
Published 2018-07-01

A New Method to Correct for Habitat Filtering in Microbial Correlation Networks

by Vanessa Brisson, Vanessa Brisson, Vanessa Brisson, Jennifer Schmidt, Trent R. Northen, Trent R. Northen, John P. Vogel, John P. Vogel, John P. Vogel, Amélie Gaudin, Amélie Gaudin
Published 2019-03-01

Microbial Ecology on Solar Panels in Berkeley, CA, United States

by Manuel Porcar, Manuel Porcar, Manuel Porcar, Katherine B. Louie, Suzanne M. Kosina, Marc W. Van Goethem, Benjamin P. Bowen, Benjamin P. Bowen, Kristie Tanner, Trent R. Northen, Trent R. Northen
Published 2018-12-01

Characteristics of Wetting-Induced Bacteriophage Blooms in Biological Soil Crust

by Marc W. Van Goethem, Tami L. Swenson, Gareth Trubl, Simon Roux, Trent R. Northen
Published 2019-12-01

Linking soil biology and chemistry in biological soil crust using isolate exometabolomics

by Tami L. Swenson, Ulas Karaoz, Joel M. Swenson, Benjamin P. Bowen, Trent R. Northen
Published 2018-01-01

Specialized Plant Growth Chamber Designs to Study Complex Rhizosphere Interactions

by Mon Oo Yee, Peter Kim, Yifan Li, Anup K. Singh, Trent R. Northen, Romy Chakraborty
Published 2021-03-01

Construction of Viable Soil Defined Media Using Quantitative Metabolomics Analysis of Soil Metabolites

by Stefan Jenkins, Tami L. Swenson, Rebecca Lau, Andrea M. Rocha, Andrea M. Rocha, Alex Aaring, Terry C. Hazen, Terry C. Hazen, Terry C. Hazen, Terry C. Hazen, Romy Chakraborty, Trent R. Northen, Trent R. Northen
Published 2017-12-01

Root morphology and exudate availability are shaped by particle size and chemistry in Brachypodium distachyon

by Joelle Sasse, Suzanne M. Kosina, Markus deRaad, Jacob S. Jordan, Katherine Whiting, Kateryna Zhalnina, Trent R. Northen
Published 2020-07-01

Bioactive diterpenoids impact the composition of the root-associated microbiome in maize (Zea mays)

by Katherine M. Murphy, Joseph Edwards, Katherine B. Louie, Benjamin P. Bowen, Venkatesan Sundaresan, Trent R. Northen, Philipp Zerbe
Published 2021-01-01

Taxonomic and Metabolic Incongruence in the Ancient Genus Streptomyces

by Marc G. Chevrette, Camila Carlos-Shanley, Katherine B. Louie, Benjamin P. Bowen, Trent R. Northen, Cameron R. Currie
Published 2019-09-01

Functional Genomics of Novel Secondary Metabolites from Diverse Cyanobacteria Using Untargeted Metabolomics

by Muriel Gugger, Nikos C. Kyrpides, Ferran Garcia-Pichel, Nick Jose, Natalia N. Ivanova, Richard Baran, Trent R. Northen
Published 2013-09-01

Flux balance modeling to predict bacterial survival during pulsed-activity events

by N. A. Jose, R. Lau, T. L. Swenson, N. Klitgord, F. Garcia-Pichel, B. P. Bowen, R. Baran, T. R. Northen
Published 2018-04-01

Web of microbes (WoM): a curated microbial exometabolomics database for linking chemistry and microbes

by Suzanne M. Kosina, Annette M. Greiner, Rebecca K. Lau, Stefan Jenkins, Richard Baran, Benjamin P. Bowen, Trent R. Northen
Published 2018-09-01

A robust gene-stacking method utilizing yeast assembly for plant synthetic biology

by Patrick M. Shih, Khanh Vuu, Nasim Mansoori, Leïla Ayad, Katherine B. Louie, Benjamin P. Bowen, Trent R. Northen, Dominique Loqué
Published 2016-10-01

Experimental and theoretical insights into the effects of pH on catalysis of bond-cleavage by the lignin peroxidase isozyme H8 from Phanerochaete chrysosporium

by Le Thanh Mai Pham, Kai Deng, Trent R. Northen, Steven W. Singer, Paul D. Adams, Blake A. Simmons, Kenneth L. Sale
Published 2021-04-01

Probing the active fraction of soil microbiomes using BONCAT-FACS

by Estelle Couradeau, Joelle Sasse, Danielle Goudeau, Nandita Nath, Terry C. Hazen, Ben P. Bowen, Romy Chakraborty, Rex R. Malmstrom, Trent R. Northen
Published 2019-06-01

Rapid characterization of the activities of lignin-modifying enzymes based on nanostructure-initiator mass spectrometry (NIMS)

by Kai Deng, Jijiao Zeng, Gang Cheng, Jian Gao, Kenneth L. Sale, Blake A. Simmons, Anup K. Singh, Paul D. Adams, Trent R. Northen
Published 2018-09-01

Microfabrication of a Chamber for High-Resolution, In Situ Imaging of the Whole Root for Plant–Microbe Interactions

by Lauren K. Jabusch, Peter W. Kim, Dawn Chiniquy, Zhiying Zhao, Bing Wang, Benjamin Bowen, Ashley J. Kang, Yasuo Yoshikuni, Adam M. Deutschbauer, Anup K. Singh, Trent R. Northen
Published 2021-07-01

A fungal transcription factor essential for starch degradation affects integration of carbon and nitrogen metabolism.

by Yi Xiong, Vincent W Wu, Andrea Lubbe, Lina Qin, Siwen Deng, Megan Kennedy, Diane Bauer, Vasanth R Singan, Kerrie Barry, Trent R Northen, Igor V Grigoriev, N Louise Glass
Published 2017-05-01

Toward a Predictive Understanding of Earth’s Microbiomes to Address 21st Century Challenges

by Martin J. Blaser, Zoe G. Cardon, Mildred K. Cho, Jeffrey L. Dangl, Timothy J. Donohue, Jessica L. Green, Rob Knight, Mary E. Maxon, Trent R. Northen, Katherine S. Pollard, Eoin L. Brodie
Published 2016-05-01