DecGPU: distributed error correction on massively parallel graphics processing units using CUDA and MPI

by Schmidt Bertil, Liu Yongchao, Maskell Douglas L
Published 2011-03-01

Parallelized short read assembly of large genomes using de Bruijn graphs

by Liu Yongchao, Schmidt Bertil, Maskell Douglas L
Published 2011-08-01

CUDASW++: optimizing Smith-Waterman sequence database searches for CUDA-enabled graphics processing units

by Maskell Douglas L, Liu Yongchao, Schmidt Bertil
Published 2009-05-01

CUDASW++2.0: enhanced Smith-Waterman protein database search on CUDA-enabled GPUs based on SIMT and virtualized SIMD abstractions

by Schmidt Bertil, Liu Yongchao, Maskell Douglas L
Published 2010-04-01

Comparative phyloinformatics of virus genes at micro and macro levels in a distributed computing environment

by Schmidt Bertil, Trehan Rahul, Singh Dadabhai T, Bretschneider Timo
Published 2008-02-01

CBESW: Sequence Alignment on the Playstation 3

by Hieu Nim, Kwoh Chee, Wirawan Adrianto, Schmidt Bertil
Published 2008-09-01

Predicting peptides binding to MHC class II molecules using multi-objective evolutionary algorithms

by Feng Lin, Schmidt Bertil, Rajapakse Menaka, Brusic Vladimir
Published 2007-11-01

Parallel mutual information estimation for inferring gene regulatory networks on GPUs

by Liu Weiguo, Schmidt Bertil, Shi Haixiang, Müller-Wittig Wolfgang
Published 2011-06-01