Event extraction on PubMed scale

by Björne Jari, Ginter Filip, Pyysalo Sampo
Published 2010-10-01

An analysis of gene/protein associations at PubMed scale

by Pyysalo Sampo, Ohta Tomoko, Tsujii Jun’ichi
Published 2011-10-01

Event extraction for DNA methylation

by Ohta Tomoko, Pyysalo Sampo, Miwa Makoto, Tsujii Jun’ichi
Published 2011-10-01

Comparative analysis of five protein-protein interaction corpora

by Ginter Filip, Björne Jari, Heimonen Juho, Airola Antti, Pyysalo Sampo, Salakoski Tapio
Published 2008-04-01

Investigating heterogeneous protein annotations toward cross-corpora utilization

by Pyysalo Sampo, Sætre Rune, Kim Jin-Dong, Wang Yue, Tsujii Jun'ichi
Published 2009-12-01

BioInfer: a corpus for information extraction in the biomedical domain

by Järvinen Jouni, Boberg Jorma, Björne Jari, Heimonen Juho, Ginter Filip, Pyysalo Sampo, Salakoski Tapio
Published 2007-02-01

Ontology design patterns to disambiguate relations between genes and gene products in GENIA

by Hoehndorf Robert, Ngonga Ngomo Axel-Cyrille, Pyysalo Sampo, Ohta Tomoko, Oellrich Anika, Rebholz-Schuhmann Dietrich
Published 2011-10-01

Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011

by Pyysalo Sampo, Ohta Tomoko, Rak Rafal, Sullivan Dan, Mao Chunhong, Wang Chunxia, Sobral Bruno, Tsujii Jun'ichi, Ananiadou Sophia
Published 2012-06-01

U-Compare bio-event meta-service: compatible BioNLP event extraction services

by Kano Yoshinobu, Björne Jari, Ginter Filip, Salakoski Tapio, Buyko Ekaterina, Hahn Udo, Cohen K Bretonnel, Verspoor Karin, Roeder Christophe, Hunter Lawrence E, Kilicoglu Halil, Bergler Sabine, Van Landeghem Sofie, Van Parys Thomas, Van de Peer Yves, Miwa Makoto, Ananiadou Sophia, Neves Mariana, Pascual-Montano Alberto, Özgür Arzucan, Radev Dragomir R, Riedel Sebastian, Sætre Rune, Chun Hong-Woo, Kim Jin-Dong, Pyysalo Sampo, Ohta Tomoko, Tsujii Jun'ichi
Published 2011-12-01