DecGPU: distributed error correction on massively parallel graphics processing units using CUDA and MPI

by Schmidt Bertil, Liu Yongchao, Maskell Douglas L
Published 2011-03-01

Parallelized short read assembly of large genomes using de Bruijn graphs

by Liu Yongchao, Schmidt Bertil, Maskell Douglas L
Published 2011-08-01

CUDASW++: optimizing Smith-Waterman sequence database searches for CUDA-enabled graphics processing units

by Maskell Douglas L, Liu Yongchao, Schmidt Bertil
Published 2009-05-01

CUDASW++2.0: enhanced Smith-Waterman protein database search on CUDA-enabled GPUs based on SIMT and virtualized SIMD abstractions

by Schmidt Bertil, Liu Yongchao, Maskell Douglas L
Published 2010-04-01