Assessment of replicate bias in 454 pyrosequencing and a multi-purpose read-filtering tool

by Klopp Christophe, Noirot Céline, Jérôme Mariette
Published 2011-05-01

NG6: Integrated next generation sequencing storage and processing environment

by Mariette Jérôme, Escudié Frédéric, Allias Nicolas, Salin Gérald, Noirot Céline, Thomas Sylvain, Klopp Christophe
Published 2012-09-01

RNA-Seq reveals genotype-specific molecular responses to water deficit in eucalyptus

by Villar Emilie, Klopp Christophe, Noirot Céline, Novaes Evandro, Kirst Matias, Plomion Christophe, Gion Jean-Marc
Published 2011-11-01

Detection of genes involved in bud phenology in sessile oak (<it>Quercus petraea</it> Matt. Liebl) combining digital expression analysis and Q-PCR

by Ueno Saneyoshi, Klopp Christophe, Noirot Céline, Léger Valérie, Prince Elodie, Kremer Antoine, Plomion Christophe, Le Provost Grégoire
Published 2011-09-01

Deciphering cork formation in <it>Quercus suber</it>

by Paiva Jorge AP, Fevereiro Pedro, Marques Pedro, Rodrigues José, Le Provost Grégoire, Plomion Christophe, Grima-Pettenati Jacqueline, Bouchez Olivier, Klopp Christophe, Berges Hélène, Graça José
Published 2011-09-01

Non PCR-amplified Transcripts and AFLP fragments as reduced representations of the quail genome for 454 Titanium sequencing

by Leterrier Christine, Richard Sabine, Gourichon David, Noirot Céline, Klopp Christophe, Bouchez Olivier, Vignoles Florence, Feve Katia, Leroux Sophie, Beaumont Catherine, Minvielle Francis, Vignal Alain, Pitel Frédérique
Published 2010-07-01

Transcriptome profiling of the feeding-to-fasting transition in chicken liver

by Aubry Marc, Klopp Christophe, Moreews François, Lecerf Frédéric, Blavy Pierre, Duclos Michel J, Désert Colette, Herault Frédéric, Le Roy Pascale, Berri Cécile, Douaire Madeleine, Diot Christian, Lagarrigue Sandrine
Published 2008-12-01

Fine mapping of complex traits in non-model species: using next generation sequencing and advanced intercross lines in Japanese quail

by Frésard Laure, Leroux Sophie, Dehais Patrice, Servin Bertrand, Gilbert Hélène, Bouchez Olivier, Klopp Christophe, Cabau Cédric, Vignoles Florence, Feve Katia, Ricros Amélie, Gourichon David, Diot Christian, Richard Sabine, Leterrier Christine, Beaumont Catherine, Vignal Alain, Minvielle Francis, Pitel Frédérique
Published 2012-10-01

Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak

by Léger Patrick, Cabane Cyril, Abadie Pierre, Derory Jérémy, Brendel Oliver, Murat Florent, Abrouk Michael, Salse Jérôme, Salin Franck, Frigerio Jean-Marc, Noirot Céline, Klopp Christophe, Léger Valérie, Le Provost Grégoire, Ueno Saneyoshi, Barré Aurélien, de Daruvar Antoine, Couloux Arnaud, Wincker Patrick, Reviron Marie-Pierre, Kremer Antoine, Plomion Christophe
Published 2010-11-01

Generation and analysis of a 29,745 unique Expressed Sequence Tags from the Pacific oyster (<it>Crassostrea gigas</it>) assembled into a publicly accessible database: the GigasData...

by Klopp Christophe, Moreews François, Wincker Patrick, Gavory Frederick, Moal Jeanne, Corporeau Charlotte, Sauvage Christopher, Lapègue Sylvie, Davey Grace, Reinhardt Richard, Prunet Patrick, Shaw Jenny, Lindeque Penelope, Fabioux Caroline, Tanguy Arnaud, Moraga Dario, Bachère Evelyne, Gueguen Yannick, de Lorgeril Julien, Boulo Viviane, Lelong Christophe, Huvet Arnaud, Fleury Elodie, Mathieu Michel, Boudry Pierre, Favrel Pascal
Published 2009-07-01

Strengthening insights into host responses to mastitis infection in ruminants by combining heterogeneous microarray data sources

by Pisoni Giuliano, Boman Guro M, Olsaker Ingrid, Smits Mari A, Smith Hilde E, de Greeff Astrid, Glass Elizabeth J, Jensen Kirsty, Petzl Wolfram, Seyfert Hans-Martin, Cabau Cédric, Klopp Christophe, Pinard van der Laan Marie-Hélène, Waddington Dave, Bishop Stephen C, Sclep Gert, Badaoui Bouabid, Genini Sem, Moroni Paolo, Castiglioni Bianca, Cremonesi Paola, Del Corvo Marcello, Foulon Eliane, Foucras Gilles, Rupp Rachel, Giuffra Elisabetta
Published 2011-05-01