flowClust: a Bioconductor package for automated gating of flow cytometry data

by Lo Kenneth, Hahne Florian, Brinkman Ryan R, Gottardo Raphael
Published 2009-05-01

Scoring relevancy of features based on combinatorial analysis of Lasso with application to lymphoma diagnosis

by Zare Habil, Haffari Gholamreza, Gupta Arvind, Brinkman Ryan R
Published 2013-01-01

Data reduction for spectral clustering to analyze high throughput flow cytometry data

by Shooshtari Parisa, Zare Habil, Gupta Arvind, Brinkman Ryan R
Published 2010-07-01

Flow cytometry data standards

by Kollmann Tobias R, Shooshtari Parisa, Spidlen Josef, Brinkman Ryan R
Published 2011-03-01

OntoFox: web-based support for ontology reuse

by Courtot Mélanie, Xiang Zuoshuang, Brinkman Ryan R, Ruttenberg Alan, He Yongqun
Published 2010-06-01

flowCore: a Bioconductor package for high throughput flow cytometry

by Spidlen Josef, Sarkar Deepayan, Haaland Perry, Ellis Byron, Brinkman Ryan R, LeMeur Nolwenn, Hahne Florian, Strain Errol, Gentleman Robert
Published 2009-04-01

FuGEFlow: data model and markup language for flow cytometry

by Manion Frank J, Jones Andrew R, Gasparetto Maura, Wilkinson Peter, Spidlen Josef, Tchuvatkina Olga, Qian Yu, Scheuermann Richard H, Sekaly Rafick-Pierre, Brinkman Ryan R
Published 2009-06-01

Modeling biomedical experimental processes with OBI

by Brinkman Ryan R, Courtot Mélanie, Derom Dirk, Fostel Jennifer M, He Yongqun, Lord Phillip, Malone James, Parkinson Helen, Peters Bjoern, Rocca-Serra Philippe, Ruttenberg Alan, Sansone Susanna-Assunta, Soldatova Larisa N, Stoeckert Christian J, Turner Jessica A, Zheng Jie
Published 2010-06-01