HOME: a histogram based machine learning approach for effective identification of differentially methylated regions

by Akanksha Srivastava, Yuliya V. Karpievitch, Steven R. Eichten, Justin O. Borevitz, Ryan Lister
Published 2019-05-01

Metabolomics data normalization with EigenMS.

by Yuliya V Karpievitch, Sonja B Nikolic, Richard Wilson, James E Sharman, Lindsay M Edwards
Published 2014-01-01

An introspective comparison of random forest-based classifiers for the analysis of cluster-correlated data by way of RF++.

by Yuliya V Karpievitch, Elizabeth G Hill, Anthony P Leclerc, Alan R Dabney, Jonas S Almeida
Published 2009-09-01

Population scale mapping of transposable element diversity reveals links to gene regulation and epigenomic variation

by Tim Stuart, Steven R Eichten, Jonathan Cahn, Yuliya V Karpievitch, Justin O Borevitz, Ryan Lister
Published 2016-12-01

Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination

by Reena Narsai, Quentin Gouil, David Secco, Akanksha Srivastava, Yuliya V. Karpievitch, Lim Chee Liew, Ryan Lister, Mathew G. Lewsey, James Whelan
Published 2017-09-01