BACPHLIP: predicting bacteriophage lifestyle from conserved protein domains

by Adam J. Hockenberry, Claus O. Wilke
Published 2021-05-01

Phylogenetic Weighting Does Little to Improve the Accuracy of Evolutionary Coupling Analyses

by Adam J. Hockenberry, Claus O. Wilke
Published 2019-10-01

Evolutionary couplings detect side-chain interactions

by Adam J. Hockenberry, Claus O. Wilke
Published 2019-07-01

Predicting bacterial growth conditions from mRNA and protein abundances.

by M Umut Caglar, Adam J Hockenberry, Claus O Wilke
Published 2018-01-01

Computational investigation of the changing patterns of subtype specific NMDA receptor activation during physiological glutamatergic neurotransmission.

by Pallab Singh, Adam J Hockenberry, Vineet R Tiruvadi, David F Meaney
Published 2011-06-01

Depletion of Shine-Dalgarno Sequences Within Bacterial Coding Regions Is Expression Dependent

by Chuyue Yang, Adam J. Hockenberry, Michael C. Jewett, Luís A. N. Amaral
Published 2016-11-01

Leveraging genome-wide datasets to quantify the functional role of the anti-Shine–Dalgarno sequence in regulating translation efficiency

by Adam J. Hockenberry, Adam R. Pah, Michael C. Jewett, Luís A. N. Amaral
Published 2017-01-01

NullSeq: A Tool for Generating Random Coding Sequences with Desired Amino Acid and GC Contents.

by Sophia S Liu, Adam J Hockenberry, Andrea Lancichinetti, Michael C Jewett, Luís A N Amaral
Published 2016-11-01

Assembly and functionality of the ribosome with tethered subunits

by Nikolay A. Aleksashin, Margus Leppik, Adam J. Hockenberry, Dorota Klepacki, Nora Vázquez-Laslop, Michael C. Jewett, Jaanus Remme, Alexander S. Mankin
Published 2019-02-01